Rhodobacter capsulatus: RCAP_rcc03311
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Entry
RCAP_rcc03311 CDS
T01213
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rcp
Rhodobacter capsulatus
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RCAP_rcc03311 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcp03019
]
RCAP_rcc03311 (rnc)
03009 Ribosome biogenesis [BR:
rcp03009
]
RCAP_rcc03311 (rnc)
03036 Chromosome and associated proteins [BR:
rcp03036
]
RCAP_rcc03311 (rnc)
Enzymes [BR:
rcp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RCAP_rcc03311 (rnc)
Messenger RNA biogenesis [BR:
rcp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RCAP_rcc03311 (rnc)
Ribosome biogenesis [BR:
rcp03009
]
Eukaryotic type
90S particles
RNase
RCAP_rcc03311 (rnc)
Prokaryotic type
rRNA processing factors
RCAP_rcc03311 (rnc)
Chromosome and associated proteins [BR:
rcp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RCAP_rcc03311 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
ADE87035
UniProt:
D5AS13
LinkDB
All DBs
Position
complement(3505436..3506122)
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AA seq
228 aa
AA seq
DB search
MKIAADLSAFMDRLGHRFTTPEHLVRALTHSSLGSATRPDNQRLEFLGDRVLGLSMAEAL
FHADGRASEGQLAPRFNALVRKETCAAVARDIDLGAVLKLGRSEMMSGGRRKDALLGDAM
EAVIAAVYLDAGFEVARALVLRLWAGRIQSVDNDARDPKTALQEWAQARGLPPPRYETLG
REGPDHAPQFRIAVVLASGETEEAQAGSKRNAEQAAAKALLERLERGA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgcggcagacctctctgccttcatggaccggctcgggcatcgtttcacgacg
cccgagcatcttgttcgggcgttgacgcattcctcgctgggctcggccacgcggcccgac
aaccagcggctggagtttctgggcgaccgggtgctgggcctctcgatggccgaggcgctg
tttcacgccgatggccgggcctccgaggggcagctggcgccccggttcaacgccctggtg
cgcaaggaaacctgtgccgccgtcgcgcgcgacatcgatcttggcgcggtgctgaaactg
ggccggtccgagatgatgtcgggcgggcggcgcaaggatgcgcttttgggcgacgcgatg
gaggcggtgattgccgccgtctatctggatgcgggcttcgaggtcgcccgcgcgctggtg
ctgcggctctgggccgggcggatccagtccgtcgacaacgacgcccgcgatccgaagacg
gcgcttcaggaatgggcccaggcccgcggcctgccgccgccgcgctatgaaacattgggc
cgcgagggccccgatcacgcgccgcaattccgcatcgcggtggtgctggcctcgggcgag
accgaagaggcgcaggccggatcgaaacgcaatgcggaacaggccgccgcaaaggccctt
ctggaacggttggagagaggcgcatga
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