KEGG   Rhodobacter capsulatus: RCAP_rcc03311
Entry
RCAP_rcc03311     CDS       T01213                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
rcp  Rhodobacter capsulatus
Brite
KEGG Orthology (KO) [BR:rcp00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    RCAP_rcc03311 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcp03019]
    RCAP_rcc03311 (rnc)
   03009 Ribosome biogenesis [BR:rcp03009]
    RCAP_rcc03311 (rnc)
   03036 Chromosome and associated proteins [BR:rcp03036]
    RCAP_rcc03311 (rnc)
Enzymes [BR:rcp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     RCAP_rcc03311 (rnc)
Messenger RNA biogenesis [BR:rcp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     RCAP_rcc03311 (rnc)
Ribosome biogenesis [BR:rcp03009]
 Eukaryotic type
  90S particles
   RNase
    RCAP_rcc03311 (rnc)
 Prokaryotic type
  rRNA processing factors
   RCAP_rcc03311 (rnc)
Chromosome and associated proteins [BR:rcp03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     RCAP_rcc03311 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM RM44_endonuclase
Other DBs
NCBI-ProteinID: ADE87035
UniProt: D5AS13
LinkDB
Position
complement(3505436..3506122)
AA seq 228 aa
MKIAADLSAFMDRLGHRFTTPEHLVRALTHSSLGSATRPDNQRLEFLGDRVLGLSMAEAL
FHADGRASEGQLAPRFNALVRKETCAAVARDIDLGAVLKLGRSEMMSGGRRKDALLGDAM
EAVIAAVYLDAGFEVARALVLRLWAGRIQSVDNDARDPKTALQEWAQARGLPPPRYETLG
REGPDHAPQFRIAVVLASGETEEAQAGSKRNAEQAAAKALLERLERGA
NT seq 687 nt   +upstreamnt  +downstreamnt
atgaaaattgcggcagacctctctgccttcatggaccggctcgggcatcgtttcacgacg
cccgagcatcttgttcgggcgttgacgcattcctcgctgggctcggccacgcggcccgac
aaccagcggctggagtttctgggcgaccgggtgctgggcctctcgatggccgaggcgctg
tttcacgccgatggccgggcctccgaggggcagctggcgccccggttcaacgccctggtg
cgcaaggaaacctgtgccgccgtcgcgcgcgacatcgatcttggcgcggtgctgaaactg
ggccggtccgagatgatgtcgggcgggcggcgcaaggatgcgcttttgggcgacgcgatg
gaggcggtgattgccgccgtctatctggatgcgggcttcgaggtcgcccgcgcgctggtg
ctgcggctctgggccgggcggatccagtccgtcgacaacgacgcccgcgatccgaagacg
gcgcttcaggaatgggcccaggcccgcggcctgccgccgccgcgctatgaaacattgggc
cgcgagggccccgatcacgcgccgcaattccgcatcgcggtggtgctggcctcgggcgag
accgaagaggcgcaggccggatcgaaacgcaatgcggaacaggccgccgcaaaggccctt
ctggaacggttggagagaggcgcatga

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