Rhodobacter capsulatus: RCAP_rcc03342
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Entry
RCAP_rcc03342 CDS
T01213
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp00230
Purine metabolism
rcp00240
Pyrimidine metabolism
rcp01100
Metabolic pathways
rcp01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RCAP_rcc03342 (nrdD)
00240 Pyrimidine metabolism
RCAP_rcc03342 (nrdD)
Enzymes [BR:
rcp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
RCAP_rcc03342 (nrdD)
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GFIT
Motif
Pfam:
NRDD
ATP-cone
RHA1_ro05818_N
HMBD
DUF7108_C
Motif
Other DBs
NCBI-ProteinID:
ADE87066
UniProt:
D5AS44
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All DBs
Position
3533952..3535982
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AA seq
676 aa
AA seq
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MPIADAALTAPAGFSTLRTRDGALVPFDARRIVAALARAGDASGEFGAAEARDLTQAVLD
RLALLAPASPPDVETIQNMVEAVLADTAHVATARAYAVYRDQHARLRADNRVLIDVERSV
SEYLERSDWRVNANANQGYSLGGMILNISGKVTANYWLSHVYPPEVGEAHREGDIHIHDL
DMFAGYCAGWSLRTLLHEGLNGVPGAIESAPPAHLSSALGQIVNFLGTLQNEWAGAQAFS
SFDTYLAPYVRLDGLSYAQVRQAMQEFIYNLNVPSRWGTQTPFTNLTFDWTCPEDLRDQV
PMVQGREVGFTYGDLQAEMDLINRAYIEVMTAGDAKGRVFTFPIPTYNITPDFPWESDNA
DALFEMTAKYGLPYFQNFVNSELQPHMVRSMCCRLQLDLTELLKRGNGLFGSAEQTGSLG
VVTLNCARLGHLHRGDEGELMVALDHLARLARTSLEIKRKVIQRHIDAGLFPYTKRYLGT
LRNHFSTLGVNGLNEMVRNFTADAEDITTEAGKALALRVLDRLRAQMVAFQEETGHLYNL
EATPAEGTTYRFAREDRKRFPGILQAGTADQPYYTNSSQLPVGFTDDPFEALAHQEALQA
KYTGGTVLHLYMGSRVSSAEACRKLVRRALTNFRLPYITVTPTFSICPKHGYIAGEHEFC
PKCDAELIAKKRACAC
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgccgatgctgctttgactgcccccgcgggtttttccaccctgcgcacccgc
gatggcgcgcttgtgccctttgacgcccgccgcatcgtggcggcgctggcgcgggcgggc
gatgccagcggcgaattcggcgcggccgaggcccgggacctgacgcaagcggtgcttgac
cggctggcgcttctggccccggccagcccccccgatgtcgagacgatccagaacatggtc
gaggcggtcctggccgataccgcccatgttgccaccgcccgcgcctatgcggtctaccgc
gaccagcacgcccgcctgcgcgcggacaaccgggtgctgatcgacgttgaacgctcggtc
agcgaatatctggaacgctccgactggcgggtgaatgccaatgccaatcagggctattcg
ctgggcgggatgatcctgaacatctcgggcaaggtgacggcgaattactggctgagccat
gtctatccgcccgaggtcggcgaagcgcatcgcgagggcgacatccatatccacgatctg
gacatgttcgcgggctattgcgcgggctggtcgctgcgcacgctgctgcacgaggggctg
aacggcgtgcccggcgcgatcgaatccgccccgcccgcgcatctgtcaagcgcgctgggg
cagatcgtcaactttctgggcacgttgcagaacgaatgggcgggggcgcaggcgttttcc
tcctttgacacctatctggcgccctatgtgcggctggacgggctgagctatgcgcaggtc
cgtcaggcgatgcaggaattcatctacaacctgaatgtcccctcacgctggggcacgcag
acgccctttaccaacctgacctttgactggacctgccccgaggatctgcgcgatcaggtg
cccatggtgcagggccgcgaggtgggcttcacctatggcgatctgcaggccgagatggac
ctgatcaaccgcgcctatatcgaggtgatgacggcgggcgatgccaaggggcgggttttc
acctttccgatccccacctacaacatcaccccggattttccgtgggagagcgacaacgcc
gatgcgctgttcgagatgacggcgaagtacgggcttccgtatttccagaatttcgtgaat
tcggaattgcagccgcatatggtgcgctcgatgtgctgccggttgcagctggacctgacc
gagctgctcaagcgcggcaacgggctgttcggctcggcggaacagaccggatcgctgggc
gtcgtcacgctcaattgcgcgcggctcggtcatctgcaccgcggcgacgagggcgagctg
atggtggcgctggatcatctggcgcggctcgcgcgcaccagccttgagatcaagcgcaag
gtgatccagcgccatatcgatgccgggcttttcccctataccaagcgctaccttggcacg
ctgcgcaaccacttctcgacgctcggcgtgaacgggctgaacgagatggtgcggaatttc
accgccgatgccgaggatatcaccaccgaggcgggcaaggcgctggcgctgcgggtgctt
gatcggctgcgggcgcagatggtggcctttcaggaagagaccggccatctttacaacctt
gaagccaccccggccgagggcacgacctatcgctttgcccgcgaagaccgcaagcgcttc
cccggcatcctgcaggcgggcacggccgatcagccctattacaccaattcctcgcagctg
ccggtgggcttcaccgatgacccgttcgaagccctggcgcatcaggaagcgctgcaggcg
aaatacaccggcggcaccgtgctgcatctttacatgggcagccgggtctcctcggccgag
gcctgccgcaaactggtgcgccgggcgctgacgaacttccgcctgccctatatcaccgtc
acccccaccttctcgatctgcccgaaacacggctacatcgcgggcgaacacgaattctgc
ccgaaatgcgatgccgaactgatcgcgaagaaacgcgcctgcgcctgctga
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