Rhodobacter capsulatus: RCAP_rcc03426
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Entry
RCAP_rcc03426 CDS
T01213
Name
(GenBank) AMP-dependent synthetase and ligase family protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp00061
Fatty acid biosynthesis
rcp00071
Fatty acid degradation
rcp01100
Metabolic pathways
rcp01212
Fatty acid metabolism
rcp02024
Quorum sensing
rcp04146
Peroxisome
Module
rcp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RCAP_rcc03426
00071 Fatty acid degradation
RCAP_rcc03426
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RCAP_rcc03426
09145 Cellular community - prokaryotes
02024 Quorum sensing
RCAP_rcc03426
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rcp01004
]
RCAP_rcc03426
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcp04147
]
RCAP_rcc03426
Enzymes [BR:
rcp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RCAP_rcc03426
Lipid biosynthesis proteins [BR:
rcp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RCAP_rcc03426
Exosome [BR:
rcp04147
]
Exosomal proteins
Exosomal proteins of breast milk
RCAP_rcc03426
Exosomal proteins of breast cancer cells
RCAP_rcc03426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ADE87150
UniProt:
D5ASQ9
LinkDB
All DBs
Position
3627749..3629911
Genome browser
AA seq
720 aa
AA seq
DB search
MADQDQGATAQSIPALLALNVERYGSRPAYREKEFGIWQVWTWAEAAEEIRAMAMGFLSL
GVERGDHVAIIGRNRPAHYWAMVAAQMCGAVPVPLYQDAVAEEMAYVLDHCGARFVVCGD
QEQVDKVVEVEDRIHHIQHVMYTDKRGMRKYDHSRMNHLADIVAEGKAGHFRYEGELDKR
IAELTADSTCVMLYTSGTTGKPKGVVLSNRNIIETARASVAFDHLGCDEDVLAYLPMAWV
GDFIFSIGQAMVAGFCVNCPESPATMMTDLREIGPTYFFAPPRIFETMLTNVMIRMEDAG
DLKHGLFKHFMDFAKTTGETYGMPRYRVKRSKPTLRRRWRWAWRYAMGIGFSVETMVENA
VRLALVRLRHPLAHRKHFHARGPLLNLYPQPLRDYFNYRTGEVTIFSPLKNTLGLSRVRV
AYTAGEAIGPEIFEFYRSMGINLKQLYGQTEASVFITQQPDGQVRADTVGVPSPGVEVKI
GETGEVFYRSPGTFVEYFRNPESTASTKDAEGWVATGDAGFFEPGTGHLRIIDRAKDVGK
MADGRLFAPKYVENKLKFYPSILEAVVFGKDRDRCTAFINIDLTAVGNWAERNNIAYASY
QELAGHSQVYAMIREHIDAVNRSVAQDPMLSGCQIHRFLILHKELDADDGEMTRTRKVRR
NVVAEKYADLIAALYDGRDRITTETEVTYEDGRKGAIRATLRIEDATVAPEARMQKEAAE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcaggatcagggggcgacggcgcagtcgatcccggcgcttctggcgctgaac
gtcgaaaggtatggcagccgtcccgcctatcgcgagaaggaattcggcatctggcaggtc
tggacctgggccgaggcggccgaggaaatccgcgcgatggcgatggggtttctgagcctg
ggggtggaacggggcgatcacgtcgccatcatcggccgcaaccgtccggcgcattactgg
gcgatggtggcggcgcagatgtgcggcgcggtgcccgtgccgctctatcaggacgccgtg
gccgaggagatggcctatgtgctcgatcactgcggcgcccgcttcgtggtctgcggcgat
caggaacaggtcgacaaggtggtcgaggtcgaggatcgcatccaccacatccagcatgtc
atgtataccgacaagcgcggcatgcggaaatacgaccattcccggatgaaccatctggcc
gatatcgtcgccgaggggaaggccgggcatttccgctatgaaggcgagctggacaagcgc
atcgcggaactgaccgcggacagcacctgcgtgatgctctacacttcggggacgaccggc
aagcccaagggggtggtgctgtcgaaccgcaacatcatcgagaccgcccgcgcctcggtc
gcctttgaccatctgggctgcgacgaggatgtgctggcctatctgccgatggcctgggtg
ggcgatttcatcttttccatcggtcaggcgatggtggcgggcttttgcgtgaactgcccc
gaaagcccggcgacgatgatgaccgacctgcgcgaaatcgggccgacctatttctttgcg
cccccccgcatctttgagaccatgctgacgaacgtgatgatccggatggaggacgcgggc
gatctgaaacatgggttgttcaagcatttcatggacttcgccaagaccaccggggaaacc
tacgggatgccgcggtatcgggtgaaacgctcgaaaccgacgctgcggcggcgctggcgc
tgggcctggcgctatgcgatggggatcggcttttcggtcgagacgatggtggaaaacgcg
gtccggctggccttggtgcggctgcgccacccgctcgcgcatcgcaagcatttccacgcc
cggggacctttgctgaacctttatccgcagcctttgcgcgattacttcaactaccgcacc
ggcgaggtgacgatcttttcgcccttgaagaacacgctcggcctgagccgcgtccgcgtc
gcctataccgcgggcgaggcgatcggccccgagatcttcgaattctaccgctcgatgggc
atcaatctgaaacagctttacggccagaccgaggcctcggttttcatcacccagcaaccc
gacggacaggtgcgcgccgatacggtgggcgtgccgagccccggtgtcgaggtgaagatc
ggcgagacgggcgaggtcttttaccgctcgcccgggacctttgtcgaatatttcagaaat
cccgaaagcacggcctcgaccaaggatgccgagggctgggtggcgacgggcgacgccggt
ttctttgaacccggcaccgggcatctgcgcatcatcgaccgcgcgaaagacgtggggaaa
atggcggacgggcggctgtttgcaccgaaatacgttgaaaacaagctgaagttctatccc
tcgatcctggaggccgtggtcttcggcaaggatcgcgaccgctgcaccgccttcatcaac
atcgacctgaccgcggtcggcaactgggcggaacgcaacaacatcgcctatgccagctat
caggaactggccggtcacagccaggtctatgcgatgatccgcgagcatatcgacgcggtg
aaccgctcggtcgcgcaggatccgatgctctcgggctgccagatccaccgcttcctgatc
ctgcacaaggagttggacgccgatgacggcgagatgacccgcacccgcaaggtccgccgc
aatgtcgtggccgagaaatacgccgatctgatcgccgcgctttatgacgggcgggacagg
atcaccaccgaaaccgaagtgacctacgaggacgggcgcaagggggcgatcagggccacg
ctccgcatcgaggatgccaccgtcgcgcccgaggcgcgcatgcagaaagaggccgcggaa
tga
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