Rhodobacter capsulatus: RCAP_rcc03453
Help
Entry
RCAP_rcc03453 CDS
T01213
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RCAP_rcc03453 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcp03019
]
RCAP_rcc03453 (recQ)
03400 DNA repair and recombination proteins [BR:
rcp03400
]
RCAP_rcc03453 (recQ)
Enzymes [BR:
rcp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RCAP_rcc03453 (recQ)
Messenger RNA biogenesis [BR:
rcp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RCAP_rcc03453 (recQ)
DNA repair and recombination proteins [BR:
rcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RCAP_rcc03453 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
ResIII
Rhodanese
Luteo_PO
Motif
Other DBs
NCBI-ProteinID:
ADE87177
UniProt:
D5AST6
LinkDB
All DBs
Position
complement(3663382..3665445)
Genome browser
AA seq
687 aa
AA seq
DB search
MTLPDPSPEAMLASVFGFHAFRPGQEEIVRAVLAGRNTLAIMPTGGGKSLCFQLPALCLP
GLTVVISPLIALMRDQVRSLREAGVEAGALTSGNTEEETEAVFAAIDAGRLKLLYIAPER
LAGSGTLALLRRAKTGLIAVDEAHCVSQWGHDFRPDYLRIGDLRRALDVPLAAFTATADE
ETRAEIVTRLFDGIPPATFLRGFDRPNISLAFEPKDQPRRQILDYVAARRGQSGIVYCAS
RAKTEQLAAALIEAGHPACHYHGGMEAEDRRRVETRFQREDGLIVVATVAFGMGIDKPDI
RWVAHADLPKSIESYYQEIGRAGRDGAPAETLTLYGADDVRFRRQQIDEGLAPPERKAAD
HGRLNALLGLAEATGCRRQRLLAYFGETSGPCGNCDLCETPPDLFDGTEAVRKALSAALR
TEESYGAGHLIEVLLGQTNDRITARGHDRLPTFGVGKDLSRTEWQAVFRQMQGHDLIRPD
AARHGALVMTDRARPILRGEERITLRRDLVRKAKVRHVPKALVSDEDAPLLSALKAKRRA
LAEAAGLPAYMIFPDRTLIEMAELRPTTLDQFAQVNGVGAKKLESYGRAFLEVIAGAGAA
EPVHPARRKLAGTAAASLYDALDGAQRALARGEDGHERFLSCTATMLRRIAEVKPKTRAD
LERIAGMGEAKLDRFADAFLALIAEHG
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgcccgaccccagccccgaggcaatgcttgcctcggttttcggattccatgcc
ttccgaccggggcaggaggaaatcgtgcgggcggttctggcagggcgcaacaccttggcg
atcatgccgacggggggcgggaaatccctgtgtttccaactgcctgccctgtgtttgccg
gggctgacggtggtcatctcgccgctcatcgcgctgatgcgcgatcaggtgcggtcgctt
cgcgaagccggggtcgaggccggggcgctgacctcgggcaataccgaggaggagaccgaa
gcggtctttgcggcgatcgatgcggggcggctgaaactcctttacatcgcgcccgagcgg
ctggccgggtcgggcacgctggcgctgttgcgccgcgcaaagaccgggctgatcgcggtc
gatgaggcgcattgcgtcagccagtggggccatgatttccgccccgattacctgcgcatc
ggcgatctgcgccgggcgctcgatgtgcccttggcggcctttaccgcgaccgcggacgag
gaaacccgggccgagatcgtcacccggctgtttgacggcatcccgcccgcgacctttctg
cgcggctttgaccggccgaacatctcgctggcgtttgagcccaaggaccagccgcggcgg
cagatcctggattatgtggcggcgcggcgcgggcaatcgggcatcgtctattgcgcctcg
cgggcgaagaccgagcaactggccgccgcgctgatcgaggcgggtcatcccgcctgccac
tatcacggcggcatggaggccgaggatcgccgccgcgtcgagacccggtttcagcgcgag
gacgggctgatcgtggtggcgacggtggcctttggcatgggcatcgacaagcccgacatc
cgctgggttgcccatgccgatctgccgaaatccattgagagctattatcaggaaatcggc
cgggcgggccgcgacggggcgcctgccgagacgctgacgctttatggtgccgacgacgtg
cgctttcgccgccagcagatcgacgagggtctggcgccgcccgaacgcaaggccgccgat
cacgggcggctgaatgcgcttctgggtctggccgaggcgacgggctgccgtcggcagcgg
cttctggcctatttcggggaaacatcagggccttgcggcaattgcgatctgtgcgagacg
ccgccggatctcttcgacggcaccgaggcggtgcgcaaggcgctttccgccgcgctgcgc
accgaggaaagctatggcgccgggcatctgatcgaggttctgctggggcagacgaatgat
cgcatcaccgcgcgcggccatgaccggctgccgacctttggcgtgggcaaggatctgagc
cgcaccgaatggcaggcggtgttccggcagatgcagggccatgacctgatccgccccgat
gcggcgcggcacggggcgctggtgatgaccgaccgcgcccggccgatcttgcgcggcgag
gaacgcatcaccctgcgccgcgatctggtgcgcaaggccaaggtcaggcatgtgccgaag
gcgctcgtgtccgatgaagacgcgccgctgctttcggcgctgaaggcgaaacggcgcgct
ttggccgaggcggcgggtctgcccgcctacatgatctttcccgaccgcaccctgatcgag
atggccgagctgcggcccacgacccttgaccagtttgcgcaggtgaacggggtgggggcg
aagaagctggaaagctatggccgcgccttcctcgaggtgatcgcgggggcgggggcggcc
gagccggtgcatccggcgcgacggaagcttgcggggacggcggcggccagcctttatgat
gcgctcgacggcgcgcagcgggcgctggcgcgcggcgaagacgggcatgagcggtttttg
tcctgcaccgcgacgatgctgcgccggatcgccgaggtgaagccgaagacccgcgccgat
ctggagcggatcgcggggatgggcgaagcgaagctcgaccgtttcgccgatgcctttctg
gcgctgatcgccgaacacggctga
DBGET
integrated database retrieval system
