Rhodobacter capsulatus: RCAP_rcc03532
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Entry
RCAP_rcc03532 CDS
T01213
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RCAP_rcc03532 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcp03400
]
RCAP_rcc03532 (mutM)
Enzymes [BR:
rcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
RCAP_rcc03532 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RCAP_rcc03532 (mutM)
DNA repair and recombination proteins [BR:
rcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RCAP_rcc03532 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
Auto_anti-p27
Fapy_DNA_glyco_C
DUF8512
C1_2
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ADE87256
UniProt:
D5ATE5
LinkDB
All DBs
Position
3736738..3737583
Genome browser
AA seq
281 aa
AA seq
DB search
MPELPEVETVRRGLAPAMEGRVIDRAEVNRPDLRWPLPEAMAERLTGARVDRLRRRSKYI
LADLSTGESLLIHLGMSGRMLVSGVMLGDFHLDHPAAQKHDHVVLHMEGGARVTFNDARR
FGAMDLVRTDREAAHWLLAGLGPEPFGNDFNEAYLIDALKSRKSPIKTALLDQHVVAGLG
NIYVSEVLFRAGIDPRRAANRIAAARLAGLVPLIREVLAEAIEAGGSSLRDHRQADGELG
YFQHSFRVYDREDDPCPACATPIKRIVQSGRSSYFCPACQK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaggtcgagacggtccgacgcggcctggcccccgcgatggagggg
cgggtgatcgaccgggccgaggtgaaccgccccgatctgcgctggcccctgcccgaagcc
atggccgagcggctgaccggggcgcgggtggaccggctgcggcggcgctcgaaatacatc
ctggccgatctgtcgaccggggaaagcctgctcattcatctgggcatgtcggggcggatg
ctggtgtccggcgtgatgctgggcgattttcacctggatcatccggcggcgcaaaagcat
gaccacgtggtcttgcacatggaggggggcgcccgggtcaccttcaacgatgcgcggcgg
ttcggggcgatggatcttgtgcgcaccgaccgcgaggcggcgcattggcttttggccggt
cttggccccgagcctttcggcaatgacttcaacgaggcttacctgatcgacgcgctgaaa
tcccgcaagagcccgatcaagaccgcgcttctggatcagcatgtcgtcgccgggcttggc
aatatctatgtgtcggaggtgctgttccgggcgggcatcgatccgcgccgggcggcaaac
cggattgcggcggcgcggctggcggggctcgtgccgctcatccgcgaggttctggccgag
gcgatcgaagcgggcggatcctccctgcgcgatcatcggcaggcggatggggagcttggc
tatttccagcacagcttccgcgtctatgaccgcgaggacgacccctgccccgcctgcgcc
acgccgatcaaacgcatcgtgcaatcgggacggtcgagttatttctgccccgcctgccag
aagtga
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