Rhodococcus coprophilus: NCTC10994_00807
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Entry
NCTC10994_00807 CDS
T06666
Symbol
hrdB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
rcr
Rhodococcus coprophilus
Brite
KEGG Orthology (KO) [BR:
rcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcr03021
]
NCTC10994_00807 (hrdB)
Transcription machinery [BR:
rcr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC10994_00807 (hrdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
SQI29115
UniProt:
A0A2X4WQA5
LinkDB
All DBs
Position
1:876186..877148
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AA seq
320 aa
AA seq
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MARPATTARVDSDIDSQSPAADLVRVYLNGIGKTALLTAADEVELAKRIEAGLYAKHVLE
TKKRLTAAKKRDLSIVVREGQAARSHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGL
IRAMEKFDYAKGFKFSTYATWWIRQAITRGMADQSRTIRLPVHLVEQVNKLARIKRELHQ
QLGREATDAELSSESGIAVEKIADLLDHSRDPVSLDMPVGNDEEAPLGDFIEDAEATSAE
NAVIAGLLHSDVRTVLGTLDEREQQVIRLRYGLDDGQPRTLDQIGKLFGLSRERVRQIER
EVMGKLREGDRADRLRAYAS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccccgcaacaaccgctcgcgtcgattcggacatcgacagccagagccccgcc
gctgatcttgtccgcgtctacctgaacggcatcggcaagacagccctgctgacggcagcc
gacgaggtggaactggccaagcggatcgaggccggcctgtatgccaagcacgtgctcgag
accaagaagcgtctcaccgccgcgaagaagcgcgatctgtcgatcgtcgtgcgcgaaggc
caggcagcccgtagccatcttctcgaggccaatcttcgcctcgtggtttctctggcgaag
cggtacaccgggcgcgggatgcccctgctggatctgatccaggaaggcaacctcggcctg
atccgcgccatggagaagttcgactacgccaagggcttcaagttctcgacctacgcgacc
tggtggatccgccaggccatcacccgcggcatggccgatcagagccgcaccatccgtctc
cccgtccacctcgtcgagcaggtcaacaagctcgcccggatcaagcgcgaactgcaccag
cagctcgggcgggaagccaccgatgcggaactgtcgagcgaatcgggcatcgcggtcgag
aagatcgccgatctgctcgatcacagccgcgacccggtgagcctcgacatgccggtcggc
aacgacgaggaagctccgctcggtgacttcatcgaggacgccgaagccacctcggcggag
aacgccgtcatcgcgggactgctgcacagtgatgtccggacggtgctgggcacgctcgac
gagcgcgagcagcaggtaatccgcctgcggtacggactcgacgacgggcagccgcgcacc
ctcgatcagatcggcaagctgttcgggttgtcgcgcgagcgggttcggcagatcgaacgc
gaagtgatgggcaagcttcgcgagggcgaccgcgcagatcgccttcgcgcatatgccagc
tga
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