Rhodococcus coprophilus: NCTC10994_01002
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Entry
NCTC10994_01002 CDS
T06666
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rcr
Rhodococcus coprophilus
Pathway
rcr02024
Quorum sensing
rcr03060
Protein export
rcr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NCTC10994_01002 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NCTC10994_01002 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC10994_01002 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rcr02044
]
NCTC10994_01002 (ffh)
Enzymes [BR:
rcr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NCTC10994_01002 (ffh)
Secretion system [BR:
rcr02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NCTC10994_01002 (ffh)
Eukaryotic Sec-SRP protein
NCTC10994_01002 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
ArsA_ATPase
cobW
nSTAND3
APS_kinase
Zeta_toxin
AAA_31
AAA_22
MeaB
AAA_16
AAA_24
NPHP3_N
AAA_18
Thymidylate_kin
AAA_33
TsaE
MobB
NTPase_1
TctA
6PF2K
ATP_bind_1
AAA_30
NACHT
Motif
Other DBs
NCBI-ProteinID:
SQI29439
UniProt:
A0A2X4TSQ6
LinkDB
All DBs
Position
1:complement(1083439..1085007)
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AA seq
522 aa
AA seq
DB search
MFESLSDRLTGVLKDLRGKGRLSDADIDATCREIRLALLEADVALPVVREFIKKIKERAK
GAEVHGALNPAQQVVKIVNEELVKILGGETRRLRFAKTPPTVIMLAGLQGAGKTTLAGKL
AKWLKDQGHTPLLVACDLQRPGAVTQLQVVGERAGVSVFAPHPGTSIGGGENALGITAAD
PVAVAEQGIAEAKTKQYDVVIVDTAGRLGIDEELMAQAAGIRDAVHPDETLFVLDAMIGQ
DAVSTAEAFREGVGFSGVVLTKLDGDARGGAALSVRELTGQPIMFASTGEKLEDFDVFHP
ERMASRILGMGDVLTLIEQAEQVFDAEQAEATANRIGSGELTLEDFLDQMMAVRKMGPIA
NLLGMLPGAGQMKDALANVDEKQLDRIQAIIRGMTPAERANPKIINGSRRLRIANGSGVK
VSDVNQLVDRFFEARKMMTAMAGQMGIGGRKNQRSKKGKKGKKGGRGPTPPKVRGGLPGG
FPGLPGGLPGGMPDLSKMPKGLDELPPGLEGFDFSQFKMPKK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaatccctttccgacaggttgacaggggtcctgaaggacctgcggggcaaggga
cgcctgtccgacgcagacatcgacgcgacgtgccgcgagatccgcctcgcgctcctcgaa
gccgacgtcgcgctgcccgtcgtgcgcgagttcatcaagaagatcaaggaacgcgccaag
ggtgccgaggtacacggtgccctcaaccccgctcagcaggtcgtcaagatcgtcaacgag
gaactcgtcaagatcctcggcggcgagactcgccggctgcggttcgcgaagacccccccg
acggtcatcatgctcgccggtctgcagggcgcgggtaagaccaccctggccggcaagctc
gccaagtggctcaaggatcagggccacaccccgctgctcgtcgcatgcgacctgcagcgc
ccgggcgccgtcacccagctgcaggtggtcggtgagcgcgcaggggtctcggtgttcgcg
cctcaccccggcacctccatcggcggtggcgagaacgccctcggtatcacggcggcggac
cccgtcgcggtggctgagcagggcatcgccgaggcgaagaccaagcagtacgacgtggtc
atcgtcgacaccgccggccgcctcggtatcgacgaggaactgatggcccaggcggccggg
atccgcgacgcggttcatcccgacgagacgctgttcgtcctcgacgcgatgatcggtcag
gacgcggtcagcaccgcagaggccttccgcgaaggggtcggattcagcggcgtggtgctc
accaagctcgacggcgacgcgcgcggcggtgccgcactcagcgtccgtgagctgaccggc
cagccgatcatgttcgcatccaccggcgagaagctcgaagacttcgacgtcttccacccc
gagcgcatggcgagccgcatcctcggcatgggcgacgttctgacgctcatcgagcaggcc
gagcaggttttcgacgccgagcaggccgaagcaaccgccaacaggatcggttcgggcgag
ctcaccctcgaagacttcctcgaccagatgatggccgtgcggaagatggggcccatcgcg
aatctcctgggcatgcttcccggcgcgggacagatgaaggacgcgctggccaacgtcgac
gagaagcaactcgaccgtatccaggcgatcatccgcggtatgacccccgccgagcgggcc
aacccgaagatcatcaacggctcgcgccgcctccgcatcgccaacggctccggcgtgaag
gtctccgacgtcaaccagctcgtcgatcgtttcttcgaagcccgcaagatgatgacggcg
atggccggccagatgggcataggtggccgcaagaaccagcggtcgaagaagggcaagaag
ggcaagaagggcgggcgcggccccaccccgccgaaggtgcggggcggcttgcccggtgga
ttcccgggcttgcccggcggattgccgggtggcatgcccgatctgtcgaagatgccgaag
ggactcgacgagctgcctccgggcctcgaaggattcgacttctcgcagttcaagatgccg
aagaagtaa
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