Rhodococcus coprophilus: NCTC10994_01114
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Entry
NCTC10994_01114 CDS
T06666
Name
(GenBank) Ornithine/acetylornithine aminotransferase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
rcr
Rhodococcus coprophilus
Brite
KEGG Orthology (KO) [BR:
rcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcr03400
]
NCTC10994_01114
DNA repair and recombination proteins [BR:
rcr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
NCTC10994_01114
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_16
AAA
TrwB_AAD_bind
SLFN-g3_helicase
DEAD
ResIII
AAA_30
FtsK_SpoIIIE
Zot
DUF5852
T2SSE
CbiA
AAA_7
nSTAND3
AAA_18
AAA_19
AAA_28
Zeta_toxin
AAA_6
Motif
Other DBs
NCBI-ProteinID:
SQI29556
UniProt:
A0A2X4TQ69
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All DBs
Position
1:complement(1209119..1210726)
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AA seq
535 aa
AA seq
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MPDRDKRHEDPGDASRPADAAARIAAGYAVSGPALDLGAVVVDGVANPSAKVRIPLATLN
RHGLVTGATGTGKTATLQLLAEELSAAGVPVVMSDVKGDLSGLTGEGKIEEKIVARAIDT
GDESWEPHGYPVQFYSLGSEGAAIPVRATVTSFGPILLSKVLELNATQESTLGLIFHWAD
QRGLALLDLKDLSEVVRYLTSDEGKADLKSIGGVSGATAGVILRALVNLEQAGGDTFFGE
PELETEDLLRLADGHGVISLFELGDRATQPALFSTFLMWLIADLFQALPEVGDLEKPKLV
FIFDEAHLLFTDASKAFQRQIEQTVKLIRSKGVGVIFCTQLPSDVPQAVLSQLGARIQHA
MRAFTPEDRKALDKVVRTYPETDVYDLGRALTELGTGEAVVTVLSETGAPTPVAWTRIRP
PRSLMGSVGENAILAAAQSSALYGKYGRTIDRESAYEKLTASVGGAPDVDPEFETPPLPA
GAGEVLPESARDDEPSIIERAMGSPAVNSFLRSAASAAGREISRSIFGTGRRRRR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgccggaccgagacaagcgccacgaagaccccggcgatgcgtcgcgcccggcggacgca
gccgcacggatcgccgccggatacgcggtgtccggacccgccctcgacctcggcgccgtt
gtagtcgacggcgtggcgaacccgtccgccaaggtccgaatccctctcgccacgctgaac
cgccacggcctcgtcaccggtgctaccgggacgggaaagaccgcgacgctgcagttgctc
gccgaggagttgtcggccgccggtgtgcccgtggtgatgtccgacgtcaaaggcgatctg
tcgggcctcacgggcgaaggcaagatcgaggagaagatcgttgcgcgcgcgatcgacacc
ggtgacgagtcgtgggaaccgcacggctacccggtgcagttctattcgctcggttccgag
ggcgcggccatcccggtccgggcgactgtcacctcgttcgggccgatcctgctgagcaaa
gtgctcgagctcaatgcaacccaggagtccaccctcggcctgatcttccactgggcagac
cagcgcggcctcgcgttgctggatctgaaggacctgagcgaggtcgtcaggtatctgacc
agcgacgagggaaaagccgacctcaagagcatcggcggggtgtccggagcgacggccggg
gtgatcctgcgcgcactggtcaacctcgagcaagccggcggagacacttttttcggggaa
ccggaactcgagaccgaggatctgctccgcctcgccgacggccacggcgtcatcagcctg
ttcgaactcggcgatcgcgcgacccagccggcgttgttctcgaccttcctgatgtggctg
atcgccgacctgttccaggcgttgccggaggtcggggatctcgagaagccgaagctcgtg
ttcatcttcgacgaagcgcatctgctgttcaccgatgcgtccaaggcgtttcagcgacag
atcgagcagaccgtcaaactgatccgctcgaagggcgtcggggtgatcttctgcacccaa
ctgccatcggacgtgccccaggcggtgttgtcgcaactgggagcacgcatccagcacgcg
atgcgcgcgttcacccccgaagaccgcaaggctctggacaaggttgtgcgcacctacccg
gagacggacgtatacgacctcggacgggcactgacagaactcggaaccggcgaagccgtc
gtgacggtgttgtcggagaccggtgcgcccactcccgtcgcctggacccggattcggcca
ccgcgctccctgatgggttcggtgggggagaacgcgatcctggcggccgctcagtcgagc
gcgctctacggcaagtacggccgcacgatcgaccgcgaatcggcgtacgagaagttgacc
gcatcggtgggcggggcccccgacgtcgatccggagttcgagaccccgccgctgcctgcc
ggagcgggggaggtactgccggaatccgcgcgggacgacgagccgtcgatcatcgaacga
gcgatggggagcccggcggtcaacagcttcctgcggtcggcggcgtccgcggcgggccgg
gagatcagccgcagcatcttcggaaccggacgccgccgccggcgttag
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