Rhodococcus coprophilus: NCTC10994_01278
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Entry
NCTC10994_01278 CDS
T06666
Name
(GenBank) putative TetR family transcriptional regulator
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
rcr
Rhodococcus coprophilus
Brite
KEGG Orthology (KO) [BR:
rcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcr03000
]
NCTC10994_01278
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
rcr01504
]
NCTC10994_01278
Transcription factors [BR:
rcr03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
NCTC10994_01278
Antimicrobial resistance genes [BR:
rcr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
NCTC10994_01278
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_29
TFIIB_C_2
TetR_C_24
TetR_C_13
TetR_HI_0893_C
Motif
Other DBs
NCBI-ProteinID:
SQI29853
UniProt:
A0A2X4TSM4
LinkDB
All DBs
Position
1:1393151..1393831
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AA seq
226 aa
AA seq
DB search
MPTQAPRVTKRADAVRNVERILDAAIDCLTERPTASMADIAKRASLGRVTLYGHFASRAE
LLEAVVTRVLEQGERALGAVDLSGNPRDALRRLIENSWVLTSQAASIIAAAEEELPPGRM
QELHADPAARVEALIERGRSEGVFRTDMPTSWLVTVIHQILHGAATEISTARLDPRDASE
RITTTILAVLDNPIERWPNRSGGQRGSGPSTSGSDSSAVQALSDPS
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgccgacacaggcgccccgtgtcaccaagcgtgccgacgcggtgcgcaacgtagagcgc
atcctcgacgccgccatcgactgccttacagaacgacccacggcgtcgatggccgacatc
gccaaacgagcgagcctcggcagagtcaccttgtacggccacttcgcgtcacgcgccgag
ttactcgaggcggtcgtcacgcgggtgctcgaacagggtgaacgggccctcggtgccgtc
gacctgtccggcaatccccgcgacgcgttgcggcgcctgatcgaaaacagttgggtcctg
acgagtcaggcagcgtcgatcatcgccgccgccgaagaggaattaccacccggaagaatg
caggaactgcacgccgacccggctgcgcgcgtcgaagcgctcatcgaacgcggacgaagc
gaaggcgtgttccggacggatatgcccacgtcctggctcgtcaccgtgatccaccagatc
ctgcacggcgcagccaccgagatctcgaccgcgcgcctcgatccccgcgacgcatccgaa
cgcatcacgacgacgatcctcgcagtcctggacaatccgatcgagcgatggccgaatcgc
tcagggggtcaacgcggatccggtccctcgacgagcggcagcgactcgtcggccgtccag
gcgttgagcgacccgtcgtag
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