Rhodococcus coprophilus: NCTC10994_01293
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Entry
NCTC10994_01293 CDS
T06666
Symbol
gabD_1
Name
(GenBank) gamma-hydrobutyrate dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rcr
Rhodococcus coprophilus
Pathway
rcr00250
Alanine, aspartate and glutamate metabolism
rcr00310
Lysine degradation
rcr00350
Tyrosine metabolism
rcr00650
Butanoate metabolism
rcr00760
Nicotinate and nicotinamide metabolism
rcr01100
Metabolic pathways
rcr01120
Microbial metabolism in diverse environments
Module
rcr_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
NCTC10994_01293 (gabD_1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NCTC10994_01293 (gabD_1)
00310 Lysine degradation
NCTC10994_01293 (gabD_1)
00350 Tyrosine metabolism
NCTC10994_01293 (gabD_1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
NCTC10994_01293 (gabD_1)
Enzymes [BR:
rcr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
NCTC10994_01293 (gabD_1)
1.2.1.20 glutarate-semialdehyde dehydrogenase
NCTC10994_01293 (gabD_1)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
NCTC10994_01293 (gabD_1)
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Motif
Pfam:
Aldedh
OmdA
Motif
Other DBs
NCBI-ProteinID:
SQI29876
UniProt:
A0A2X4TR56
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All DBs
Position
1:1407448..1408884
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AA seq
478 aa
AA seq
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MTALDIPNRLWLGGTLTTSSTGATFPVEDPATGETLAEVADASPADSARALDLADEAQAA
WAAKPPRERGEILRTAFELVKKRADGFARTITLEMGKTLAEAHGEVNYGAEFLRWNAEEA
VRIGGRTTTPPSGNGRILVTKEPVGPVLAVTPWNFPLAMATRKIGPALAAGCTIIVKPAA
ETPLTMLMLGQVFADAGLPEGVLSILPTSDAAALTESLITDPRLRKITFTGSTGVGKLLV
RQSADRLLRTSMELGGNAPFLVFDDADIDAAVDGAMAAKMRNGGEACTAANRFYVAKEVS
EDFTERLVARMSALRMGHGLDDGTDLGPLITAVQRGRVHELVVDAIAQGARLLVGGVVPG
GPGTFYPPTVLDQVPADARVVREEIFGPVVAITTFDTEAEAITAANDTEYGLAAYFYTRD
LDRAMRVASALKAGMVGVNRGVVSDVAAPFGGVKESGFGREGGTEGIEEYLETKYVAL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgctcgacattccgaaccggctgtggctcggcggcactctcaccacctcatcc
acgggtgccacgttccccgtcgaggatcccgcgaccggtgagacgctcgccgaggtcgcc
gacgcgtcccccgcagacagtgcgcgggctctcgatcttgccgacgaagcgcaagccgcg
tgggcagcaaaaccccctcgtgagcggggtgaaatcctccgcaccgcattcgaactcgtg
aagaaacgtgccgacggcttcgcccgcaccatcactctcgaaatgggcaaaaccctcgcc
gaggcccacggcgaagtgaactacggtgccgagttcctgcggtggaacgccgaggaagcc
gtacgcatcggtgggcgcaccaccacgccaccctccggcaacggccgaatcctggtcacc
aaagaacccgtcgggcctgtcctggcggtgactccgtggaacttcccgttggccatggca
actcgcaagatcggccccgcgctcgctgcgggctgcacaatcatcgtcaaacccgctgcc
gagacacccttgacgatgctgatgctcggacaggtcttcgccgacgccggactccctgaa
ggggtgctgtcgatcctgccgacttcggacgctgccgcgctgaccgaatctctgatcacc
gatccgcgcctgcggaagatcaccttcaccggctccaccggcgtcggcaaactgctggtt
cgccagtcagccgaccgcctgctgcgcacctccatggaactcggcggcaacgcaccgttc
ctcgtgttcgacgacgccgacatcgacgccgccgtcgacggcgccatggcggcgaaaatg
cggaacggtggcgaagcgtgcaccgccgcgaaccgcttctatgtagcgaaagaggtctcg
gaggacttcaccgaaagactggtcgcccggatgtccgcactgcggatgggccacggtctc
gacgacggcaccgacctcggccccctcatcaccgctgtgcagcgtggccgggtacacgag
ctggtcgtcgatgcgatcgcgcaaggcgcgcgtctcctggtcggcggcgttgtccccggc
ggccccggcaccttctacccacccaccgttctcgaccaggttcccgccgacgcccgtgtg
gtgcgcgaggagatcttcggcccggtcgtcgccatcaccaccttcgacaccgaggccgaa
gcgatcaccgctgcaaacgacaccgaatacggcctagccgcatatttctacacccgcgat
ctcgaccgcgcgatgcgcgtcgcgtcggcgctgaaggctgggatggtgggcgtgaaccga
ggagtcgtctccgacgtcgccgccccgttcggcggggtgaaggagtcggggttcggtcgt
gagggtggcacggaagggatcgaggagtatctggagaccaagtacgtcgcgctgtag
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