Rhodococcus coprophilus: NCTC10994_01327
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Entry
NCTC10994_01327 CDS
T06666
Symbol
dnaQ
Name
(GenBank) DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rcr
Rhodococcus coprophilus
Pathway
rcr03030
DNA replication
rcr03430
Mismatch repair
rcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10994_01327 (dnaQ)
03430 Mismatch repair
NCTC10994_01327 (dnaQ)
03440 Homologous recombination
NCTC10994_01327 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcr03032
]
NCTC10994_01327 (dnaQ)
03400 DNA repair and recombination proteins [BR:
rcr03400
]
NCTC10994_01327 (dnaQ)
Enzymes [BR:
rcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10994_01327 (dnaQ)
DNA replication proteins [BR:
rcr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10994_01327 (dnaQ)
DNA repair and recombination proteins [BR:
rcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10994_01327 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
DNA_pol_A_exo1
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
SQI29938
UniProt:
A0A2X4U482
LinkDB
All DBs
Position
1:complement(1475134..1476411)
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AA seq
425 aa
AA seq
DB search
MIDLRAQSDRAAMLPSGHRWVVVDVETSGLRPNAHRVLSVAALALREDGSVEREFSSLID
PGGDPGPVHVHNLTRERLAGAPRFEDISSELAEILDGGTVVAHNASFDYGFLDAEFRRAG
KTLPVQQRLCTLALSRRLDLDLPNYRLSTLAEHWQIQQLQAHDAYDDARVLTEIFLRSAG
MAETLQLPLPVVNCRSSKSVYPPSVTRVPCQWKNPGKLTDAGLVQGMKVVISGSTTTPRL
TLAERLAGAGLDVLNQVSRQTSVLVCNDPVVQTAKVRKAMAEGIPVISERHLDDLLARVA
PGEPKVATVIDVVPQAQIPVETPQVVTAPAPDDNAPAQGWALQGHKPKLWSGRKVLLLGG
THLEAVMMRSRIAQLGARPALNFTAAVTDALVLGGGESDKRMPRVLQRALPVLTPTTSTP
RWRRV
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatcttcgtgcgcagtccgacagggccgcgatgctgcccagcggtcatcgctgg
gtagtggtggacgtcgagacgtccgggttacgtccgaacgcgcatcgcgtcctcagcgtc
gccgcgctcgcgctccgtgaggacgggtcggtggaacgcgaattctcgtcgctcatcgat
cccggcggtgaccccggcccggtgcacgttcacaacctcacgcgcgaacggctggcgggt
gcaccgcgcttcgaggacatctcctccgagcttgcggagattctcgacggcgggaccgtc
gtcgcccacaacgcgtcgttcgattacggctttctcgacgccgagttccggcgggccgga
aagacacttccggtgcagcaacggctgtgcacgctcgcgctgtcacgccgcctcgacctc
gaccttccgaactatcggctctcgacgcttgcggagcactggcagatccagcagctccag
gcgcacgatgcgtacgacgacgctcgtgtgctgaccgaaatcttcctgcgcagcgccgga
atggcggagacactgcaacttccgctgccggtcgtgaattgccggagcagcaagtcggtg
tatccgccatcggtgacccgggtgccctgccagtggaagaacccgggcaagcttacggac
gccggtctggtgcagggcatgaaggtcgtgatcagcgggtcgaccaccacgccgcggctg
acgctcgccgagcgcctcgccggagccgggctcgacgtcctcaaccaggtgagccggcag
accagtgtgctggtgtgcaacgaccccgtcgtgcagaccgccaaggtgcgcaaggcaatg
gccgaaggcattcccgtcatcagcgagcgacacctcgacgaccttctcgcccgggtcgcg
cccggcgagcccaaggtcgccaccgtcatcgatgtcgtgccgcaggcacagatcccggtg
gagactccgcaggtcgtcaccgcccccgcccccgatgacaacgcgccggcacagggctgg
gcactgcagggccacaagcccaagctgtggtcgggccgaaaagtactgttgctgggcgga
acccatctcgaagcggtgatgatgcggtcacgcatcgcgcaactcggtgccaggcccgcc
ctgaacttcacggccgcggtcaccgacgcgctggtcctcggcggcggcgaaagcgacaag
cggatgccccgggtgctgcaacgcgcgctgcccgtcctcaccccgacgacgtcaacgccg
cggtggaggagggtgtga
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