Rhodococcus coprophilus: NCTC10994_01556
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Entry
NCTC10994_01556 CDS
T06666
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rcr
Rhodococcus coprophilus
Pathway
rcr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCTC10994_01556 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcr03400
]
NCTC10994_01556 (xseA)
Enzymes [BR:
rcr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NCTC10994_01556 (xseA)
DNA repair and recombination proteins [BR:
rcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NCTC10994_01556 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
SQI30402
UniProt:
A0A2X4U7Q9
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All DBs
Position
1:1720316..1721563
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AA seq
415 aa
AA seq
DB search
MTAAQPAARPNSPENPWPVRTVSQKVAGWIDRLGTIWVEGQVTQINARPGTRTAFLTLRD
ASVDMSLPVTCSPQLLQNSPVPITEGSRVIMFGKLTYWAGRGTLSLRVTEIRAVGIGELL
ARIERLRSLLAAEGLFDPRLKRPLPFLPRRIGLITGRASAAERDVVSVAQRRWPAVQIDV
RHATVQGPTAVPQILDALEALDADPAVDVIILARGGGSVEDLLPFSDEALCRAIVACTTP
VVSAIGHEPDSPLSDHVADLRAATPTDAAKRVVPDAVAEQYLVDELRARSASALRSWVRR
EEHVIAQLRDRPVLADPFRALDRRHEEIDRLRTAGRRDIARTIAMASSTLEHMCARLSTL
GPAATLARGYAVVQRVVPGGNPEVIRSLGEMPIGTQLRVRVADGAARAAVMGHEK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcggcacagcccgcggcgcggccgaactccccggagaatccgtggcccgtccgc
accgtctcgcagaaggtcgccgggtggatcgaccgcctcggcaccatctgggtggaaggt
caggtcacgcagatcaacgcgcgcccgggcacccggacggcgttcctgaccctgcgcgac
gcgtccgtggacatgtcgttgccggtgacatgctcgccgcagttgctgcagaactcgccg
gtcccgatcaccgagggcagccgcgtcatcatgttcggcaagctcacctactgggcggga
cgcggcacgctgtcactgcgcgtgacggagatccgggccgtcggcatcggtgagttgctc
gcccgtatcgaacggttgcggagtctgctcgcggccgagggcctgttcgatccgcggctc
aagcggcccttgccgttccttccccgtcgcatcggcctgatcaccggccgcgccagcgca
gccgaacgggacgtggtgtcggtcgctcagcggcggtggcccgccgtgcagatcgatgtg
cggcacgcgaccgtgcagggcccgaccgcggtgccgcagattttggacgcgctcgaagcg
ctcgacgccgacccggcagtggacgtgatcatcctcgcccgcggcggcggcagcgtcgaa
gatctgctgcccttctccgacgaggcgctgtgccgggccatcgtcgcatgcaccacaccc
gtggtcagcgccatcggacacgagcccgacagcccgttgtccgatcatgtcgccgacctc
agagcggcgacccccaccgacgctgccaagcgcgtcgtcccggatgcggtcgccgagcag
tacctggtcgacgaactgcgtgcccggtccgcctcggctctgcggagctgggtgcgtcgg
gaggaacacgtgatcgcgcagctacgcgaccggccggtgctcgccgacccgttccgtgcg
ctggaccgcagacacgaggagatcgacaggctgcggacggcgggtcgccgcgacatcgca
cggacgatcgcgatggcgtcgtcgacgctcgagcacatgtgcgcgcggctgagcacgctc
ggacccgcagcgaccctggcgcgcggctacgccgtagtccagcgggtcgtcccgggtggc
aacccggaggtgatccggtcgctgggcgaaatgcccatcggcacccagctccgggtacgg
gtggccgacggcgcggcacgggcagcagtgatgggacacgagaaatga
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