Rhodococcus coprophilus: NCTC10994_01705
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Entry
NCTC10994_01705 CDS
T06666
Symbol
gabD_2
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rcr
Rhodococcus coprophilus
Pathway
rcr00250
Alanine, aspartate and glutamate metabolism
rcr00310
Lysine degradation
rcr00350
Tyrosine metabolism
rcr00650
Butanoate metabolism
rcr00760
Nicotinate and nicotinamide metabolism
rcr01100
Metabolic pathways
rcr01120
Microbial metabolism in diverse environments
Module
rcr_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
NCTC10994_01705 (gabD_2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NCTC10994_01705 (gabD_2)
00310 Lysine degradation
NCTC10994_01705 (gabD_2)
00350 Tyrosine metabolism
NCTC10994_01705 (gabD_2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
NCTC10994_01705 (gabD_2)
Enzymes [BR:
rcr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
NCTC10994_01705 (gabD_2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
NCTC10994_01705 (gabD_2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
NCTC10994_01705 (gabD_2)
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Motif
Pfam:
Aldedh
DUF3102
Motif
Other DBs
NCBI-ProteinID:
SQI30619
UniProt:
A0A2X4TW87
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Position
1:complement(1872834..1874294)
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AA seq
486 aa
AA seq
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MGSMDTSELIRSVPTDLFLGGEWVPSGNRATFPVHDPATGDVLAEVADAAPEDAMRALDA
AVAAGRDWAATPPRERAELLRTVWSKISERADDFALLMTLEMGKALPESRSEVAYGTEFL
RWFSEEAVRIAGRYTPAPAGNGRILVTKQPVGPCLAITPWNFPLAMGTRKIAPALAAGCT
MLVKPASETPLTLLLLAQIFAEAGLPAGVLSVLPTSRAGDVTGPLLEDPRLRKLTFTGST
AVGRALAEKAGRSLLRTSLELGGNAPFVVFDDADLDAAVEGAVAAKLRNGGEACTAANRF
HVANSVREEFVTKLTERMASYRLGPGTDPDTTLGPLINENQKKTVIELVEDAVAGGARVR
LGGETPEGPGWFYPATVLDDVPRSARILREEVFGPVAAVTGFDTEDEAIAAANDTEYGLA
AYIFTRDLDRALRVSDALESGIVGVNRGVVSDVAAPFGGIKSSGVGREGGTEGIEEYLET
KYIALR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatggacacatcagaattgatccggtccgtgcccaccgacctctttctcggt
ggcgaatgggtgccgtccggaaatcgagcgacatttcccgtccacgaccccgcaacgggc
gacgttctggccgaagtggccgacgctgctccggaagacgccatgcgcgccctggacgct
gcggtagcagcgggccgcgactgggccgcgacaccaccgcgtgagcgagcagaactcctc
cggacggtctggtcgaagatcagcgaacgcgccgacgacttcgcgctgctcatgacgctc
gaaatgggtaaggcgttgcccgagagtcgctccgaagtcgcctacggcacggaattcctc
cggtggttctccgaggaagcggtacgcatcgccggccgctacaccccggcccccgcaggc
aacggccggattctcgtcaccaaacaaccggtcggcccgtgcctggcgatcacgccctgg
aacttcccgctcgcgatgggcacccgcaagatcgcacccgcgctcgccgcgggatgcacg
atgctcgtcaaacccgcttcggaaacgccgctgaccctgctgctgctcgcgcagatcttc
gccgaggccggtctccccgcgggtgttttgtcggtgctcccgacttcccgcgccggtgat
gtgaccgggccgctcctcgaggatccgcgactgcgcaagctcaccttcaccggttcgacg
gcggtgggccgggcgctcgcggagaaggcgggccgttcgctgttgcggacctccctcgaa
ctcggtgggaacgcgccgttcgtcgtgttcgacgacgccgatctcgacgcggcggtcgag
ggcgcggtcgcggcgaaactgcgcaacggtggtgaggcatgcaccgctgcgaaccggttc
cacgtcgcaaattccgtgcgcgaagagttcgtcaccaagctcaccgagcgcatggcgtcg
taccgcctcgggccgggtaccgatcccgacaccacgctcgggccgctgatcaacgagaac
cagaagaagacggtgatcgaactggtcgaagacgcggtggccgggggcgcgagggtacgg
ctcggtggcgagaccccggagggcccgggatggttctacccggcgaccgtgctcgacgac
gtgccgcgcagcgcacgcatcctccgtgaggaggtcttcgggccggtggccgccgtgacc
ggcttcgacaccgaggacgaagcgatcgcggccgccaacgacaccgagtacgggctcgcg
gcatacatcttcacccgcgacctggatcgtgcgctccgggtgtcggatgccctggagtcg
ggcatcgtcggcgtcaatcggggagtggtgtcggatgtagccgcaccgttcggcgggatc
aagtcctcgggcgtcggccgtgagggcggaaccgaaggtatcgaggaatacctcgagacc
aaatacatcgcgctgcggtaa
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