Rhodococcus coprophilus: NCTC10994_01826
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Entry
NCTC10994_01826 CDS
T06666
Name
(GenBank) DNA repair helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
rcr
Rhodococcus coprophilus
Pathway
rcr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rcr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NCTC10994_01826
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10994_01826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcr03021
]
NCTC10994_01826
03400 DNA repair and recombination proteins [BR:
rcr03400
]
NCTC10994_01826
Enzymes [BR:
rcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10994_01826
Transcription machinery [BR:
rcr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NCTC10994_01826
DNA repair and recombination proteins [BR:
rcr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NCTC10994_01826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Motif
Other DBs
NCBI-ProteinID:
SQI30987
UniProt:
A0A2X4TU86
LinkDB
All DBs
Position
1:1999192..2000850
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AA seq
552 aa
AA seq
DB search
MADGPLIVQSDKTVLLEVDHPRAAEARQAIAPFAELERAPEHIHTYRVTPLALWNARAAG
HDAEQVVDALVSHSRFAVPQPLLVDIVDTMGRYGRLQLVKSPVHGLTLVSLDRAVLEEVL
RNKKIAPMLGARIDDDTVAVHPSERGRVKQMLLKIGWPAEDLAGYVDGEAHPITLDMESN
PWHLRDYQEMAADAFWAGGSGVVVLPCGAGKTMVGAAAMAKAGATTLILVTNTVAGRQWK
RELIARTSLTEEEIGEYSGEKKEIRPVTIATYQVITRKTKGEYRNLELFDSRDWGLMIYD
EVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWI
APADCVEVRVTLTDAERMAYAVAEPEERYKLCSTARTKIPVVESILAKHAGAPTLVIGAY
IDQLDELGAALDAPVIKGSTRNKEREALFDRFRAGELGVLVVSKVANFSIDLPEASVAVQ
VSGTFGSRQEEAQRLGRLLRPKHDGGQAHFYSVVSRDTLDAEYAAHRQRFLAEQGYAYRI
TDADDLLGPQIG
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacggacccttgatcgtccagtccgacaagaccgtgttgctcgaggtcgaccac
ccacgtgccgccgaagcccgacaggccatcgcgccgttcgccgaactcgagcgggccccc
gagcacatccacacctatcgggtgacaccgctcgccctctggaatgcacgggcggccggc
cacgacgcggagcaggtggtcgatgcgctggtcagccactcacggttcgccgttccgcag
ccgttgctcgtcgacatcgtcgacacgatgggccggtacgggcgactgcaactggtgaag
agtcccgtccacggcctcacgctggtgagcctggatcgcgccgtgctcgaagaggtgctg
cgaaacaagaagatcgcgcccatgctcggcgcccgcatcgacgacgacaccgtagcggtg
catcccagcgagcgcggccgcgtcaagcagatgctgctcaagatcggctggccggccgag
gacctcgcgggctacgtggacggtgaggcacacccgatcaccctcgacatggagtcgaac
ccctggcacctgcgcgactaccaggagatggccgccgatgccttctgggcgggcggatcg
ggcgtggtggtcctgccgtgcggggccggaaagacgatggtcggtgctgccgccatggcc
aaggccggggccacgacgctgatcctggtcaccaacaccgtcgccgggcggcagtggaag
cgtgaactgatcgcacgtacctccctcaccgaggaggagatcggcgagtactccggcgag
aagaaggagatccgcccggtcacgatcgccacctatcaggtgatcacccgcaagaccaag
ggcgagtaccgcaacctcgagctgttcgactcccgcgactgggggctgatgatctacgac
gaggtgcacctgcttcccgcaccggtgttccggatgaccgccgatctgcagtcgcggcga
cgcctgggcctcaccgcgaccctcgtgcgcgaggacggccgggaaggtgacgtgttctcc
ctcatcggccccaagcgctacgacgcgccgtggaaggacatcgaggcgcaggggtggatc
gccccggcggactgcgtggaagtgcgggtcacgctcaccgacgcggagcggatggcctac
gcggtcgccgaaccggaggagcggtacaagctgtgctcgaccgcacgcaccaagattccg
gtggtcgagtcgattctcgcgaaacacgcgggcgctccgactctggtcatcggtgcctac
atcgaccagctcgacgagctcggtgccgccctcgacgcccccgtcatcaaggggtcgacg
cgcaacaaggaacgcgaggcgctgttcgaccggttccgtgccggcgaactgggtgtgctc
gtggtgtcgaaggtcgcgaacttctccatcgatctgcccgaggcgtcggtcgccgtgcag
gtgtccggaacgttcggctcacgccaagaggaagctcagcgtctcggtcggttgctgcgg
cccaagcacgacggcgggcaggcgcacttctactcggtggtctcccgcgacacgctcgac
gccgaatacgcggctcaccggcagcggttcctggcggagcaagggtacgcgtaccgcatc
accgacgccgacgacctgctcggaccgcagatcggctga
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