Rhodococcus coprophilus: NCTC10994_01847
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Entry
NCTC10994_01847 CDS
T06666
Name
(GenBank) dead/deah box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
rcr
Rhodococcus coprophilus
Brite
KEGG Orthology (KO) [BR:
rcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcr03019
]
NCTC10994_01847
Enzymes [BR:
rcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NCTC10994_01847
Messenger RNA biogenesis [BR:
rcr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NCTC10994_01847
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
DSHCT
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
MTR4-like_stalk
Motif
Other DBs
NCBI-ProteinID:
SQI31008
UniProt:
A0A2X4U6Y7
LinkDB
All DBs
Position
1:2021181..2023496
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AA seq
771 aa
AA seq
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MQDGSRLAKFAAELGFTLDDFQVRSCRALEDDRDVLVCAPTGAGKTVVGEFAAYLALEKR
HTRTSPSHGTCFYTTPIKALSNQKYNDLVERFGEGEVGLLTGDITLHPHAPVVVMTTEVL
RSMLHSRSPLLDGLTHVVMDEVHYLADRERGAVWEETILYLPAQVRLASLSATVSNAEEF
GEWIRRVRGETTVVVDEVRPVPLTQHMLAGGRLFNLFSPTTGIVDDTLDRYIAHRQLADA
APPPGGRRGRRRRSTTPVPAGGDRPEIVARLEAEQLLPAIWFRFSRSGCDAAVTECLDSS
LRLTEAAEIPQIREIADQHTAALPPADLDAVGYSDWIEGLERGFAAHHAGLVPAFRHAVE
DLFSRGLVRVVFATETLAVGVNMPARTVVLERLVKPTASGPVRLTPGEYTQLTGRAGRRG
IDEQGHAVVLWNPDTLPAAVAGLASTRAYPLHSSLRVGYNTCVNLVDRLGLEGARKLLDR
SFAQFEAERSVSALSDAVRANTTVIDDLEAELADAAGFAEYRSLYERLTVARTTASAETV
TALARAVRSHPGHRRADRVHLLATAGRLAELRTDTRRMRAEIDAVTGRLRDTFDRTLAVL
EERGYLHLDPAGKSAYVTDEGRRLGRIYCTSDLLVAECVRTGAWAGLEPCELAAVTSSVL
GESRQRSTGASGSTTPAVDEALRATTRLWGELAATEERHGLTVTPDPDPVAVKAVHRWAR
GDGLAASLRVAAESGLSPGDLVRRYLRTLDLVDQTGLCRRDALPPVSFTLT
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgggtcgcggctggcgaagttcgcggccgaactcggattcaccctcgacgac
ttccaggtccggtcctgtcgcgcactcgaagacgatcgggacgtgctcgtgtgcgcgccg
accggggcaggcaagaccgtcgtcggtgaattcgcggcctatctcgccctcgagaagcgc
cacacccggacctccccgtcgcacggaacgtgcttctacaccacgcccatcaaggcgttg
agcaaccagaaatacaacgatctcgtcgaacgattcggcgagggcgaggttggcctcctc
accggcgacatcactctccacccgcacgcccccgtcgtcgtcatgacgacggaagtgctc
cgcagcatgctgcactcccgctccccgctcctcgacgggctcacccacgtcgtgatggac
gaggtgcactatctggcggaccgggagcggggagcggtctgggaagagacgatcctctat
cttccggcccaggtgcggctggccagcctatccgcgacggtgagcaatgccgaggaattc
ggagagtggatccgcagggtgcgcggcgagacgacggtggtcgtcgacgaggtccggccc
gtaccgctcacccagcacatgctggccggtggccgcctgttcaatctcttctcccccacc
accggcatcgtcgacgacacactcgaccgctacatcgcccatcggcagcttgccgacgcg
gcccctccacccggcggaagaagaggccgcagacgccgcagcaccacgccggttccggcc
ggcggcgaccgtccggagatcgtggcgcggctcgaagccgaacagcttctgccggcgatc
tggttccgcttcagccgttccgggtgcgacgcggcggtcaccgaatgcctcgactcgtcg
ctgcgtctcaccgaggcggcagagattccgcagatccgggagatcgccgaccagcacacc
gctgcccttccccccgcagacctcgacgcggtgggctattccgactggatcgagggcctc
gagcgagggttcgccgcccaccacgccggcctcgtaccggcattccggcacgcggtggag
gacctgttctcccgcgggctcgtgcgggtcgtgttcgcgacggagacactcgcggtgggc
gtcaacatgcctgcccgcacggtcgtgctcgagcgtctcgtcaaaccgactgcatccggg
ccggtgcgcctgacgcccggcgaatatacccagctcaccggccgggcggggcgacgcggg
atcgacgagcagggccacgcggtggtcctgtggaaccctgatactcttcccgctgccgtc
gccggactcgcctcgacccgcgcctacccgttgcacagctcgcttcgtgtcggttacaac
acctgcgtcaacctcgtcgatcgactcggtctcgaaggggcacggaaacttctggatcgc
tcgttcgcgcaattcgaagcggaacgatcggtgagtgcgttgtccgatgcggtgcgggcg
aacacgacggtgatcgacgatctcgaagcggaactcgccgatgcagcaggattcgccgag
tatcggagcctgtacgaacgactcaccgtcgcacgcaccaccgcctccgccgagaccgtc
accgcactcgcccgcgcggtgcgctcgcatcccggtcaccgccgggcggaccgcgtccac
ctcctggcgacagcgggccggctggccgaactgcgtaccgacacccgtcgcatgcgcgcc
gagatcgacgcggtcaccgggcgtctgcgcgacacgttcgatcgcacactcgcggtgctc
gaggaacgcggttatctccacctcgatccggccggaaagtccgcctacgtcacggacgaa
ggcaggagactcggccggatctactgcaccagtgatcttctcgtcgccgagtgtgtgcgg
accggcgcgtgggcggggctcgagccctgtgaactcgccgcggtgacgtcgagcgtgctc
ggggagagccggcagcggagcacaggagcctccggatccaccactcccgcggtggacgag
gcgcttcgcgccaccacgcggttgtggggtgagcttgccgcgaccgaggaacgacacggg
ctgacggtgactcccgatcccgatccggtggccgtgaaagccgtccaccggtgggctcgg
ggggacggactcgcggcgtctcttcgcgtcgcggcggaatccggactctcgccgggcgat
ctggtacgccgctacctgcgcaccctggatctggtcgaccagaccggcctttgccggcgc
gacgccctgcccccggtgtcgttcacgttgacgtga
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