Rhodococcus coprophilus: NCTC10994_02987
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Entry
NCTC10994_02987 CDS
T06666
Symbol
fadD_11
Name
(GenBank) fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rcr
Rhodococcus coprophilus
Pathway
rcr00061
Fatty acid biosynthesis
rcr00071
Fatty acid degradation
rcr01100
Metabolic pathways
rcr01212
Fatty acid metabolism
rcr02024
Quorum sensing
rcr04146
Peroxisome
Module
rcr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rcr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NCTC10994_02987 (fadD_11)
00071 Fatty acid degradation
NCTC10994_02987 (fadD_11)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NCTC10994_02987 (fadD_11)
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC10994_02987 (fadD_11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rcr01004
]
NCTC10994_02987 (fadD_11)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcr04147
]
NCTC10994_02987 (fadD_11)
Enzymes [BR:
rcr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NCTC10994_02987 (fadD_11)
Lipid biosynthesis proteins [BR:
rcr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NCTC10994_02987 (fadD_11)
Exosome [BR:
rcr04147
]
Exosomal proteins
Exosomal proteins of breast milk
NCTC10994_02987 (fadD_11)
Exosomal proteins of breast cancer cells
NCTC10994_02987 (fadD_11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
SQI35047
UniProt:
A0A2X4U5B4
LinkDB
All DBs
Position
1:3216130..3217584
Genome browser
AA seq
484 aa
AA seq
DB search
MTEPAVLAFEDREFTLADLDSCADGIAHRLRAHDVGIGDRVALMSSNRPEFVAAVQAVWR
LGAVVVLMSPSWKRTEVDHAFGLTAPVAAVGDSPVLAEAVAGQDVPVPMLHLDELHPGES
GSTDVPSGFTFPRVDRESDAVLVFSSGTTGLPKAVRHTHASFGAAVAHWRDALALTPADR
IQIVTPPSHILGLLNIATALEAGAWMRLHHRFDLETMLRHIERDRITVEMAVAPIAMAIA
SYPGLESLDLSSLRYIMWGATPVTPSIAETVTRRTGVPWVPAYGASEIPVIACNPIDGGR
LDSVGRAVPGVELRVVSLDTGEPVSPGERGEIQVKSRSLMAGYLPADATADAFTDGWYRT
GDVGSVDEAGWIRITDRSKEMIKVNGFQVAPAEVEAVLHGHPAVADCAVFGVADEAAGEA
VVAAVTPCAGATIDSGEIIGYVAERLASYKRPSRVVLVPEIPRLPSGKVLRRLLEERHGR
TSDE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacagagcctgccgtgctggcattcgaagatcgcgagttcaccctcgccgatctcgac
tcgtgcgccgacggcattgcccaccgcctccgcgcacacgacgtcgggatcggtgaccgg
gtcgcgctcatgtcgtcgaaccgtcccgagttcgtggcagcggtgcaggccgtctggcga
ctcggtgccgtggtggtgctcatgagcccgtcctggaagcgcaccgaggtggaccacgcg
ttcggcctcaccgctccggttgcggcggtgggagacagcccggtccttgccgaagccgtc
gccggccaggacgttcccgtcccgatgctgcatctcgacgagctgcatcccggcgaatcc
ggctcgaccgacgtcccgtccggtttcaccttcccgcgcgtggaccgggaatcggacgcg
gtgctcgtgttcagctcgggcaccaccggcctgcccaaagccgtcaggcacacccacgcc
tccttcggcgccgccgtggcgcactggcgggatgccctcgcactcacgccggccgaccgg
atccagatcgtcaccccgccgtcgcacatcctcggactgctcaacatcgccacggccctc
gaagccggtgcctggatgcggctgcatcaccggttcgacctcgaaaccatgttgcggcac
atcgagcgggaccggatcaccgtcgagatggccgtcgcacccatcgccatggccatcgcg
tcgtatcccggcctcgagtccctggacctgtcctcgctccgatacatcatgtggggcgcc
acccccgtgaccccgagcatcgcagagacggtcacgcgccgcaccggcgtgccgtgggtg
cccgcctacggagcgagcgagatacccgtgatcgcgtgcaacccgatcgacggcggacgg
ctcgacagcgtgggtcgcgcggttcccggcgtggaactgcgtgtggtgtcgctcgacacc
ggcgaaccggtcagccccggtgagcgcggtgagatccaggtgaaatcgcggtcgctcatg
gccggatacctgcccgccgacgcgaccgccgacgccttcaccgacggctggtatcggacg
ggcgacgtcggatccgtcgacgaagccggatggatccgcatcaccgaccgatccaaagag
atgatcaaggtcaacggttttcaggtcgcgcccgccgaagtcgaggcggtcctgcacgga
cacccggccgtcgccgactgcgccgtgttcggcgtcgccgacgaggccgcgggtgaagcg
gtggtcgcggcggtcaccccctgcgccggcgcgacgatcgactccggcgaaatcatcggc
tacgtcgccgagcgactcgcctcctacaagcgccccagccgtgtggtccttgtccccgaa
attccccgcttgccctccggcaaggtgttgcgccgactactcgaggagcgccatggacgt
acgtctgacgaatga
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