Rhodococcus coprophilus: NCTC10994_03435
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Entry
NCTC10994_03435 CDS
T06666
Symbol
xthA_1
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rcr
Rhodococcus coprophilus
Pathway
rcr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC10994_03435 (xthA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcr03400
]
NCTC10994_03435 (xthA_1)
Enzymes [BR:
rcr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NCTC10994_03435 (xthA_1)
DNA repair and recombination proteins [BR:
rcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NCTC10994_03435 (xthA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DUF8588
Motif
Other DBs
NCBI-ProteinID:
SQI36863
UniProt:
A0A2X4UCS2
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All DBs
Position
1:complement(3709055..3709867)
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AA seq
270 aa
AA seq
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MRLATWNVNSVRARTDRIVDWMQRTGTDVLAMQETKCKDEQFPHERFGELGYQVAHVGLS
QWNGVAIVSRVGLDDVQIGFEDQPGFSKDPEISPALEARAIGATCGGVRVWSLYVPNGRA
LDDPHYAYKLDWLAKLRADAQTWLSANPDQQIALVGDWNVAPTDDDVWDPAFFEGKTHTS
QAERDAFHSFAEAGFTDVVRPHAPGPGVYTYWDYTQLRFPKKQGMRIDFVLGSPALAARV
TGAEIDRNERKGKGASDHAPVIVDLADEGW
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgcgattggcaacgtggaatgtgaactcggtccgggcccgaaccgaccggatcgtcgac
tggatgcagcgaacgggcaccgacgtgctcgcgatgcaggagacgaagtgcaaggacgaa
cagttcccgcacgaacggttcggagaactcggatatcaggtggcgcacgtcgggctgagt
cagtggaacggcgtcgcgatcgtgtcccgggtcggactcgacgacgtgcagatcggcttc
gaggaccagccgggattctcgaaggatcccgagatcagtcccgccctcgaggcacgtgcg
atcggcgcgacgtgcgggggcgtgcgcgtgtggagcctgtacgtccccaacggtcgtgcg
ctcgacgatcctcactacgcctacaagctggattggctcgcgaaacttcgggccgacgcg
cagacctggctctccgcgaaccctgatcagcagatcgccctggtgggcgactggaatgtc
gcgcccaccgacgacgacgtctgggatcccgcgttcttcgagggaaagacccacacttcg
caggccgagcgcgacgctttccactcgttcgccgaagccggcttcaccgacgtggtgcgc
ccgcacgcgcccggccccggtgtgtacacctattgggactacacgcagttgcggttcccc
aagaagcagggcatgcgcatcgacttcgtgctcggttccccggcgttggccgcacgggtg
acaggtgccgagatcgatcgcaacgagcgcaagggcaagggcgcgagcgaccacgcgccc
gtcatcgtcgatctcgcggacgagggctggtag
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