Rhodococcus coprophilus: NCTC10994_03499
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Entry
NCTC10994_03499 CDS
T06666
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
rcr
Rhodococcus coprophilus
Brite
KEGG Orthology (KO) [BR:
rcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcr03021
]
NCTC10994_03499 (sigB)
Transcription machinery [BR:
rcr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC10994_03499 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_3
MarR_2
MarR
HTH_Crp_2
HTH_24
HTH_AsnC-type
DUF7343
HTH_31
Sigma70_ECF
HTH_23
HTH_20
NirdL-like_HTH
LacI
KORA
HTH_IclR
HTH_AraC
HTH_Tnp_4
IF2_N
Motif
Other DBs
NCBI-ProteinID:
SQI37143
UniProt:
A0A2X4UDL6
LinkDB
All DBs
Position
1:complement(3779891..3780673)
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AA seq
260 aa
AA seq
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MSRNPARSSDEYADVTETLSKLLTLGPDDPERSAIRDAVVERCLPLAEHIARRFDGRGEA
FEDLLQVARLGLVNAVDRFDTERGSDFVSFAVPTIMGEVRRHFRDTGWAVRVPRRMKELH
LSLSKATSELSQHLGRAPTAAELAEELGIDQEEVMQGLVAGNAYQTVSVDRSSPSGDDGL
TLADTLGDYDAALDEVENHEALRPLLEALPARERTVVLLRFFGNMTQTQIAERVGVSQMH
VSRLLTKTLAQLREQLGENF
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgaaatccagcaagatcgagcgacgaatacgccgacgtcaccgaaaccctgagc
aagctgctcaccctcggcccggacgatcccgagcgttcggcgatccgcgatgccgtcgtc
gaacggtgcctgcccctcgccgagcacatcgcgcggcggttcgacggccgcggcgaggca
ttcgaggatcttcttcaggtcgcccgcctcggcctcgtcaatgccgtcgaccggttcgac
accgaacgaggatcggacttcgtctcgttcgctgtgcccaccatcatgggcgaggtgcgc
cgccacttccgcgacaccggatgggcagtgcgcgtaccgcggcgcatgaaagagcttcac
ctgtccttgagcaaggccacttccgaactctcccagcacctgggccgggctcccaccgca
gcggaactcgcggaggaactgggcatcgatcaggaagaggtcatgcagggtctggtcgcc
ggtaacgcgtaccagaccgtgtccgtggaccgttcgtcgccgtcgggggacgacggcctg
accctcgcggacacgctcggtgactacgacgcagctctcgacgaggtcgagaaccacgag
gcgctgcgtccccttctcgaggcactccccgcgcgcgagcgcacagtggtgctgctccgg
ttcttcgggaacatgacgcagacccagatcgcagagcgggtcggggtgtcgcagatgcac
gtctcccgcctgctcacgaagaccctcgcgcaactgcgcgaacaactcggcgagaacttc
tga
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