Rhodococcus coprophilus: NCTC10994_03977
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Entry
NCTC10994_03977 CDS
T06666
Symbol
pcrA_4
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rcr
Rhodococcus coprophilus
Pathway
rcr03420
Nucleotide excision repair
rcr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10994_03977 (pcrA_4)
03430 Mismatch repair
NCTC10994_03977 (pcrA_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcr03400
]
NCTC10994_03977 (pcrA_4)
Enzymes [BR:
rcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10994_03977 (pcrA_4)
DNA repair and recombination proteins [BR:
rcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10994_03977 (pcrA_4)
MMR (mismatch excision repair)
Other MMR factors
NCTC10994_03977 (pcrA_4)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
SQI38730
UniProt:
A0A2X4V097
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All DBs
Position
1:4290815..4293031
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AA seq
738 aa
AA seq
DB search
MWSRTQSARRRNVRAVAMSVRTVMMEPMRVDAVTEGLDPQQAAAVRAPRGPVCVLAGAGT
GKTRTITRRIAHLVSDGHVAAGQVLAVTFTARAAGEMRSRLRELGVGAPGPSVQARTFHA
AALRQLRYFWPQVVGDTPWQLLDRKFAVVSQAAHRCGFPTDTDTVRDLLSEIEWSKGSLI
APEDYPATVARVRREPPAAAERVAAVYEMYESLKFRGDEGFYLDFDDLLLHTAAALEDNT
AVAEEFRDRYRCFVVDEYQDVTPLQQRVLDAWVGDRDDLTVVGDANQTIYSFTGASPKYL
LDFSRRFPDATVVRLERDYRSTPQVVELANRVIGEARGRIAGTRLKLIGQRPPGPEPTFA
EYDDEPAEAKATAKAIAKLMRDGVPASEIAVLYRINAQSEVYEQAFTETGIPYQVRGGEG
FFNRAEVRQAINALRQVDARNDLPEGADRGSHLVTLVRATMVPLGLTDTEPTGAQARERW
ASLTALVQLTEELLEHEPDLTLTGLLRDLAARAESRQPPTVQGVTLASLHAAKGLEWDAV
FLVGLTDGTLPITHVTGDKDTPPDEAGIEEERRLLYVGVTRARVHLALSWALSRTEGGRR
SRRRSRFLHGLIPDSSPASKIAEPASSKKKRPQCRICGKQLLGATSTMLGRCESCPSDLD
EELLVALKEWRRERSKEMKVPAYVVFSDNTLVAIAEQQPRDDRALVSIPGIGAKKLEQYG
ADVLALVRGERKAAALDL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcgcgcacacagtccgctcgccggcgcaatgtgcgcgcggtcgcgatgtcggtt
cgcactgtcatgatggagcccatgcgtgtggatgcggtaacggaaggcctggaccctcag
caggcggcggctgtgcgcgcgccgcgtggccctgtgtgcgtgctggccggcgcagggacc
ggcaagacacgcaccatcacccgccgcatcgcgcacctggtctccgacgggcacgtcgcc
gcggggcaggtactcgccgtcacgttcaccgcacgggccgccggcgagatgcgctcgcga
ttgcgcgaactgggggtcggtgcgcccgggccgtccgtgcaggcgcggacgttccacgcc
gctgcgctccgtcagctgcgctacttctggccgcaggtcgtcggcgacacgccgtggcag
ttgctcgaccgcaaattcgccgtcgtctcgcaggcggcacaccggtgtggcttcccgacc
gacaccgacaccgtgcgcgacctgctctccgagatcgaatggtccaaggggtcgctgatc
gcgccggaggattacccggccactgtcgcgcgggtccgccgcgaacctcccgctgccgcc
gagcgcgtcgcggcggtgtacgagatgtacgagtcgctcaagttccgcggcgacgaaggg
ttctatctcgatttcgacgacctgctgttgcacacggcggcggcgctcgaggacaacacc
gccgtcgcggaggagttccgcgaccgctatcgctgtttcgtcgtcgacgaataccaggac
gtcacgccgctgcagcaacgcgtgctcgacgcgtgggtcggcgaccgcgacgacctcacc
gtcgtcggcgacgccaaccagacgatctactcgttcaccggtgcctcgcccaagtacctg
ctcgacttctcgcgcaggttccccgacgccaccgtcgtccggctcgaacgcgactaccgc
tccacaccgcaggtggtggaactggcaaaccgggtgatcggcgaagcccgcggacgtatc
gcgggtacccgcctgaagctgatcgggcaacgcccacccggaccggaacccaccttcgcc
gagtacgacgacgaaccggccgaggcgaaggcgacggccaaggccatcgcgaaactgatg
cgcgacggcgtgccggcgtcggaaatcgctgtgctgtaccggatcaacgcgcaatcggag
gtgtacgagcaggccttcaccgagaccggtatcccgtaccaggtgcgcggcggcgagggc
ttcttcaaccgcgccgaggtgcggcaggcgatcaacgcgctccggcaagtggatgcacgc
aacgacctcccggagggcgccgatcgcggctcccatctcgtgacgctggtgcgagcgacg
atggtgccgttgggcctgaccgacaccgaacccaccggtgcgcaggcccgcgaacggtgg
gcctcgctcacggcgctggtccagctcaccgaggaactgctcgagcacgaacccgacctg
acgctcaccggtctgctgcgcgacctcgcggcccgcgccgagtcgcggcaacctcccacg
gtccagggtgtgacgctggcgtcgctgcacgcggcgaagggactcgagtgggacgcggtg
ttcctcgtcgggctcaccgacggcaccctgccgatcacgcacgtcaccggagacaaggac
accccgccggacgaggccggtatcgaggaggagcggcgcctgctctacgtcggggtcacc
cgtgcccgggtgcatctcgccttgtcgtgggcgctctcacgtaccgaagggggccgccga
tcgcgtcgccgctcgcggttcctgcacgggttgatccccgacagctccccggcgtcgaag
atcgctgagccggcctcctcgaagaagaagcgcccgcagtgccggatctgcggcaagcaa
ctcctcggcgccacctcgacgatgctgggccggtgcgagagctgtccgtccgacctcgac
gaggaactgctcgtcgcgctcaaggaatggcgacgcgagcggtcgaaggagatgaaggtt
cccgcctacgtcgtgttcagcgacaacaccctggtggcgattgcggaacagcagccgcgc
gacgaccgcgcgctcgtgtcgatccccggcatcggcgcgaagaagctggaacagtacggc
gccgacgtgctcgccctcgttcgcggcgaacgtaaggcggcagcgctagatctctag
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integrated database retrieval system
