Raphidiopsis curvata: NIES932_01830
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Entry
NIES932_01830 CDS
T09812
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rcs
Raphidiopsis curvata
Brite
KEGG Orthology (KO) [BR:
rcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcs03032
]
NIES932_01830
03400 DNA repair and recombination proteins [BR:
rcs03400
]
NIES932_01830
Enzymes [BR:
rcs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NIES932_01830
DNA replication proteins [BR:
rcs03032
]
Prokaryotic type
DNA Topoisomerases
NIES932_01830
DNA repair and recombination proteins [BR:
rcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NIES932_01830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BAZ88719
LinkDB
All DBs
Position
complement(210432..213083)
Genome browser
AA seq
883 aa
AA seq
DB search
MSTLVIVESPTKARTIRNYLPKDYQVEASMGHVRDLPQSASEIPATVKGEKWARFGVNIE
ADFEPVYVVLKDKKKVVSQLKEALKTANELILATDEDREGESISWHLYQLLKPKVPTKRM
VFHEITQEAIKKALANCRTIDDQLVRAQETRRILDRLVGYTLSPLLWKKISWGLSAGRVQ
SVAVRLLVNKERQRRAFREGTYWDLKASLLQAKSPFASVLITLEGTKVATGSDFDPATGQ
IAAGRNVVLLNEEQALALQERLEGKTWTVTDIEERPVIRKPAPPFTTSTLQQESNRKLRL
SARDTMRIAQNLYEQGYITYMRTDSVHLSEQAIAAARACVTQKYGQEYLSPQPRQYTTKS
KGAQEAHEAIRPAGSTFRTPQETGLSGREFAVYDLIWKRTIASQMADSRQTQIAVHLKVE
EAGFRSSGKRIDFPGYLRAYVEGSDDPEAALEDQEVILPPLKVGDHPQCIELEAVGHETQ
PPARYTEATLVKTLESEGIGRPSTYASIIGTIVDKGYAQLVSNALIPTFTAFAVTSLLEQ
HFPEIVDPSFTSKMEQTLDEIATGEAEWLPYLRRFYLGEKGLQALVQEQEDQIDPSKAKT
VELENLNAKVRIGKFGPFIEVENEGGIVTASIPKDITPADLDPEQVDMLLRQKTVGPDQL
GTHPDMGEPIYLKIGTYGPYIQLGDKTDENPKPKQASLPKGVTQENLTLDMAVGLLSLPR
HLGEHPETGAKIQASLGKFGPYVVHDQGKDGKDYRSLKVGDDVLTISLERALELLAEPKK
ARSSRNSKSKTALRELGLHPEDDAPVNIYNGEYGYYINHGKTNVGLPEGQTVESVTLSQA
LELLKAKTSSKSRSKTTSTTKKSTTAKTKSTTTKSTSRSQKKG
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacccttgttattgttgaatctccaaccaaagcccgtactattcggaactacctg
ccaaaagactaccaggtagaagcttctatgggtcatgtccgtgacttaccccagtctgct
agtgaaatccctgctactgtcaagggggaaaaatgggctcggtttggggtaaatatagaa
gcagattttgaaccagtatatgttgttcttaaagataaaaagaaagtcgtcagtcaacta
aaagaagccttaaaaactgccaatgagttgattttagcaactgacgaagaccgggaaggt
gaaagtataagctggcatttatatcagttacttaaacctaaagtgcctaccaagcgcatg
gtgtttcacgaaattacccaggaagcaattaaaaaggctttagccaactgcagaactatt
gatgatcaattagtccgcgctcaggaaactagacgtatcttagaccgtctggtgggatat
actctctctcctctgctgtggaagaaaatttcctggggactttctgcgggtagagttcaa
tctgtagcagttcgcctattagtaaataaggaacgtcaacgtcgagcttttcgtgaaggt
acctattgggatttaaaagctagtctgttacaagcaaaaagccctttcgcctcggtatta
atcaccttagaaggaacaaaagtagccacgggtagtgattttgatcccgctacaggacaa
atcgctgcaggacgtaatgtggtcctattaaatgaggagcaggctttagcactccaggaa
cgtttggaaggcaaaacttggactgtgacggatatagaagaacgtcccgtgatccgaaaa
cccgctccgccatttactacctccaccttgcagcaggagtctaaccgaaaactacgttta
tccgctagggataccatgcggatcgcccaaaatctctatgagcaaggatatatcacctac
atgcggacagattctgtacacctgtcagaacaggcgatcgccgcagctcgagcttgtgta
acccagaagtatggtcaggaatatctcagtcctcagcctagacaatataccaccaagtct
aaaggtgcccaagaagctcatgaggcaattcgccctgctggtagtacatttcgcactccc
caggaaactggtttaagtggacgagaatttgcggtttacgatttaatttggaagcgtact
attgcttcccaaatggctgactctcgccaaacccagattgctgttcacctaaaagtagaa
gaggctggattccgctcttctggtaaacgtatagactttcctggctatcttcgtgcttat
gtagaaggatcggacgacccggaagctgcactggaagatcaagaagtgatattacctcct
ttaaaagtaggtgatcacccccaatgtatagaattagaagcagtgggacatgaaacccaa
cctccagctagatatacagaagcaactttggtgaaaactctagaaagtgaagggattggt
cgtcccagcacctacgccagtattattggcaccattgttgataaaggttatgctcaactg
gtaagtaatgcgctaattcctacttttactgcctttgctgttaccagtttattagaacaa
catttcccagagattgtggatcccagttttacctcgaaaatggagcaaactctggatgaa
attgccactggtgaggctgaatggctaccctatctgcggagattctatttaggggagaaa
ggtttacaggccctagtgcaagaacaagaagatcaaattgaccctagcaaagccaaaacc
gtagaattagaaaaccttaacgccaaggttcgcattggcaagtttggtccatttattgag
gtagaaaatgaaggagggatagtaacagcgtctattcctaaagacattacaccagcggat
ttagaccctgagcaggtggatatgctactgcgacaaaaaaccgtgggaccagatcagttg
ggaacacacccagatatgggtgaacccatttacctgaaaattggcacctatggaccctat
atccaattaggagataaaaccgacgaaaatcccaaaccaaaacaagcttcccttcctaaa
ggtgttacccaagaaaacctcactttggatatggctgtgggtttattgtcattgcctcga
cacttaggagagcatccagaaacgggagcaaaaattcaagctagtttaggcaagtttgga
ccttatgtagttcatgatcaggggaaagatggtaaagattaccgctcactaaaggtgggt
gatgatgtgttgacaatttctctagaacgcgcattggaattattagcagaacccaaaaaa
gccagaagttcaagaaatagtaaatccaagactgctctacgagaattaggtttacatccg
gaagatgatgcacctgtgaatatttataacggtgaatacggttattatattaatcacggt
aaaaccaacgtcggtctaccggaaggtcaaacagtagaaagtgttactctcagccaagct
ctagaattgttaaaagctaaaacctctagtaagtccaggagtaaaactactagcacaacc
aagaaatcaactactgccaaaaccaagtcaaccaccacaaaatccaccagtaggagccaa
aagaaaggctag
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