Raphidiopsis curvata: NIES932_07280
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Entry
NIES932_07280 CDS
T09812
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
rcs
Raphidiopsis curvata
Pathway
rcs02010
ABC transporters
rcs03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rcs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES932_07280
03070 Bacterial secretion system
NIES932_07280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcs02000
]
NIES932_07280
02044 Secretion system [BR:
rcs02044
]
NIES932_07280
Transporters [BR:
rcs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES932_07280
Secretion system [BR:
rcs02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NIES932_07280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
cNMP_binding
SMC_N
Peptidase_C70
Peptidase_C39_2
AAA_22
DUF3335
IstB_IS21
AAA_29
Guanylate_cyc_2
nSTAND3
AAA_30
RsgA_GTPase
NB-ARC
Mg_chelatase
DUF87
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
BAZ89253
LinkDB
All DBs
Position
complement(767502..770219)
Genome browser
AA seq
905 aa
AA seq
DB search
MISALSQEHISAQISHILGKSLDQKDLENCLQKLEIIEPIVGKQFWQSETARPGIYLVLS
GRARILDSRNNLVSTLTSGACFGELTLFPEYDFANYVVRASVDLKIGYLPQEVINQLPSV
LERLLLQAKNWDSFLKTHLETPISTTSQNIIQFPPERKPVKPAKPERKKSQKYFPTPTVT
VSNWWHKISKRYPYFEQQSASDCGAACLVMISRYWGKNFSINRLRELANVNRSGASMKSL
TSAAESIGFATRPVKASLDKFAQQPLPAIAHWEGKHYIVVYEISKKQVIVGDPAIGQRTL
TVEEFKAGWTGYALLLEPTKSFQESIEANSPFWQLFELVKPHFQILVEVLVASILIQIFG
LVTPLFTQLLLDRVIVQGSTITLNTVGFGLLIFGLFRVVINGLRQYLLDHTANKISVALL
VGFIKHTFLLPLSFFESRYVGDIVSRVQENQKIQRFLTGEALSIILDLLTVFIYVGLMFW
YSPPLALFVLAIVPPFVFLALFATPFLRRISREVFGALAKENSYLIQALSGISSIRSLAI
EQTVRWRWEELLHNLTKKNFAVQIISNKLQIISATIQSLATTGLLWFGAWLVIQNQLTIG
QLVAFNMLLGNIIQPFQRLIVLWNQLQEVIVSTERINDVLEAEVEEDLVIQPRQSLSKLR
GEICFENVTFRYHKDSDINILENINFHIKPEQTVAVVGRSGSGKTTLSKLILGLYPATDG
RILIDNQDVTSIALKSLRSQIGVVDQDTFLFGGTIRENISIAHPESTLEEIITVAQLAGA
DEFIKFMPMGYETQIGEGGGMLSGGQRQRLAIARALLGNPRLLILDEATSHLDAESERII
QKNLQKILKGRTSLIIAHRLSTVRHADLILVLDRGILVEQGTHEELIAKRGNYYYLNQQQ
LSVVS
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagccctttctcaagaacatatatctgcccaaattagtcatattttaggtaaa
tccctggatcaaaaggatttagaaaattgtttgcaaaaattggaaatcattgaacctatt
gtggggaaacaattttggcaatctgaaaccgcccgcccaggaatttatttagtattatca
ggtcgagcgagaatattagatagtaggaacaatttagttagcactttaacatcgggagca
tgctttggggagttgacattatttcccgaatatgattttgccaattatgttgttagagct
tccgtagatttaaagattggttatcttccccaggaagtaattaatcaattgcctagtgtt
ctagagcgtctgctactccaagccaagaattgggatagctttttaaaaacacacctagaa
acaccaatctctaccacaagtcagaatatcattcaatttcctccagagaggaaaccagtt
aaaccagctaaaccagaacggaaaaaatcacaaaaatacttccctactcccacagttaca
gttagtaattggtggcataaaattagtaaacgatacccatattttgaacaacaaagtgct
tccgactgtggcgcagcttgtttagtaatgattagccgttattgggggaaaaatttcagt
attaatcgtctgcgagaactggctaatgttaaccgttctggtgcatcaatgaaaagttta
accagtgctgctgaaagtattggttttgctacccgtccagtaaaagctagtttagataaa
tttgctcagcaaccattacccgcgatcgcccattgggagggaaaacattatatagtagtc
tatgagattagcaaaaaacaggtaattgtaggagatcccgctattggacaacgaacttta
acagttgaggaatttaaagctgggtggactggttatgcactattattagaacctacaaaa
tcttttcaagagagcatagaagctaacagcccattttggcagttatttgagttagtgaaa
cctcactttcagatacttgtagaagttttggtggcttcgattttaattcagatctttggt
ttggtaacacccctatttacccaacttttgttggatcgggttatagttcagggtagcaca
ataaccctaaatacagttgggtttggtttactaatttttggattatttcgagtggtgatt
aatggacttagacaatatttattagaccacacagctaataaaattagcgtagcattattg
gtgggatttatcaaacatacatttttactacccttgtctttttttgagtctcgttatgtg
ggtgacattgtttctcgcgtacaagaaaaccaaaaaattcagcgattcctcacgggggaa
gccctatctattattctagatttactaacagtatttatttatgtggggttgatgttttgg
tatagtccacctctagcattatttgttttagcaattgtcccaccatttgtttttctagca
ttatttgccacaccttttttgagacgtattagtcgagaagtatttggagcattagccaaa
gagaatagctatttaattcaggctttaagtggcatttcttcaattcgttccttagctata
gaacaaactgtaagatggcgctgggaagaattactacataatttgaccaagaaaaacttt
gccgttcaaattattagtaataagttacaaataattagtgccaccattcaatctttagca
acaacaggcttactctggtttggcgcttggttagtaattcaaaatcagttgactattggt
caactagtagcctttaatatgttattaggcaacattatccagccttttcaaaggttaatc
gtgttgtggaatcaacttcaagaagttatagtttctaccgagcgcattaatgatgtatta
gaagcagaagtagaagaagatttagtcatccaacctcggcaaagtctatcaaaactaagg
ggagaaatttgctttgaaaatgtcacctttcgttatcacaaagacagcgatattaacatt
ttagaaaacatcaactttcacattaaacctgaacaaaccgtagcagtagtaggaagaagt
ggatctggtaagacaactctatccaaactaattttaggattatatcctgcgacagatggt
agaattttaatagacaatcaagatgtgacaagtattgctctcaaatccttacggtctcaa
ataggggttgtggaccaggacacatttttatttggtggtacaattagagaaaacatcagt
attgctcatccagaatccaccctagaagaaatcattaccgtggcacaattagcgggtgca
gatgaatttattaaatttatgcctatgggttacgaaactcaaattggtgagggaggaggt
atgttatcggggggacaaagacaacgtttagctatagctagagcattattaggaaatccg
cgccttttaatattagatgaagccaccagtcatctagatgcagaatctgaaagaattatt
caaaaaaacttgcagaaaattctcaaaggacgcactagtttaattattgcccatcgtcta
tctaccgtacgtcatgctgatttaatcttagtattagatcggggaattttagtcgaacaa
ggtactcacgaagaattgattgctaaacgtggaaattattactatcttaatcaacaacag
ttatccgtagttagttag
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