Raphidiopsis curvata: NIES932_08390
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Entry
NIES932_08390 CDS
T09812
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rcs
Raphidiopsis curvata
Pathway
rcs03030
DNA replication
rcs03430
Mismatch repair
rcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIES932_08390
03430 Mismatch repair
NIES932_08390
03440 Homologous recombination
NIES932_08390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcs03032
]
NIES932_08390
03400 DNA repair and recombination proteins [BR:
rcs03400
]
NIES932_08390
Enzymes [BR:
rcs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NIES932_08390
DNA replication proteins [BR:
rcs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NIES932_08390
DNA repair and recombination proteins [BR:
rcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NIES932_08390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
SLBP_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
BAZ89362
LinkDB
All DBs
Position
901000..903627
Genome browser
AA seq
875 aa
AA seq
DB search
MSFVPLHLHSDYSLLDGASQIPELVEQAIALGMNSLALTDHGVMYGAIELIKICRSKPGF
KPIIGNEMYIINGDIEKQERRARYHQVVLAKNTKGYKNLVKLTTISHLKGTQGKGIFSRP
CINKDLLKEHKEGLIVTSACLAGEIPQAVLGGKLETARKVATWYKRVFGEDFYLEIQDHG
SQEDRIVNVELVKIARELGIKFIATNDSHYISCFDVEAHDALLCIQTGKLIADDKRMRYS
GTEYLKSTQEMQLLFRDHLTDDVIAEAIATTTEVAEKVEVYNIMDEPKIPAPPIPTGHTP
DTYTEEVAWQGLLKRLNRKSRNEVDTVYKERLEYELKMIEQMGFSSYFLVVWDYIKFARD
HNIPVGPGRGSAAGSLVAYAMGITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIEKRDE
VISYVTEKYGADKVAQIITFNRLTSKAVLKDVARVLDIPYGEADKMAKMIPVVRGKPTKL
KVMISDETPEPEFKAKYDNEQHVRRWIDMAMRIEGTNKTFGVHAAGVVISSEPLDEIVPL
QKNNDGSVITQYFMEDLESLGLLKMDFLGLRNLTLIQKTIDLIEQNRGYTIDPDDITRQE
RKAQKILAKGEYSTLPKDVAQAYSLLESGDLEGVFQLESSGMKQIVRDLKPSNIEDISSI
LALYRPGPLDAGLIPKFINRKHGRESIDYESQILQPILNETYGIMVYQEQIMKIAQDMAG
YSLGQADLLRRAMGKKKVAEMQKQQEKFIDGATKNGVKKQVAEQLFADMLKFAEYCLSYE
TEVLTLEYGFVPIGEIVNKQIACTVFSVNDSGNVYTQPIGQWHDRGVQDLYEYCLDDGST
IRATRDHKFMTTQGKMLPIDEIFAQGWELLQVSGP
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgtacctttacaccttcatagtgactacagtttactagacggcgctagtcaa
ataccagagttagtagagcaggcgatcgccctagggatgaacagtttagcattgacagac
catggcgtaatgtatggagcgatagagctaattaaaatctgtcgtagcaaaccaggattt
aagccaataataggtaacgagatgtatatcatcaatggagacattgaaaaacaagaacgt
cgtgcgagataccatcaagttgtgttggcaaaaaacaccaaaggttataaaaacctggtc
aaactaaccaccatttctcatctaaaaggaacccagggaaaaggaattttttctcgtcct
tgtattaataaagacttgctcaaagaacataaagaaggtctaatagtaacgagcgcttgt
ttagcaggagaaattccccaagcagtactgggaggcaaattagagacagccagaaaagtt
gccacctggtataaaagagtatttggagaagacttttatttagaaattcaagatcatggt
tctcaggaagatagaattgtcaatgtagagcttgtaaaaattgcccgagaactgggcatt
aaatttattgccaccaatgattcccattacatatcctgttttgacgtagaagcccatgat
gctctactttgtattcaaactggtaaactaattgcagatgataagcgaatgcggtatagc
ggtactgagtacctaaaatccactcaagaaatgcagttactatttcgagatcacctgaca
gatgatgtaattgctgaagccattgctaccacaacagaagtagcagagaaagtggaagtc
tataatattatggacgaacccaaaattcccgcaccccctattcccacaggacacacaccg
gatacttatacagaagaagtagcttggcaaggactattaaaaagattaaatcgtaaatct
cgcaatgaggtggatactgtatacaaagaaagactagaatatgaactaaaaatgattgag
caaatgggtttttccagctactttttagtagtttgggactacattaaatttgcccgagat
cataacattcctgtaggtccaggtcgagggtcagcagctggttcattagtggcttatgct
atgggaattaccaatattgatcccgtacatcacggactactatttgagcgatttttgaac
ccagagcgcaaatctatgcctgatattgatacagacttttgtattgaaaaacgggatgaa
gtcattagttatgtaacagaaaaatatggtgcggataaggtcgcccaaatcattaccttt
aaccgtttaacatcaaaagcagtccttaaagatgtagctagggtattagatataccctat
ggtgaagcagacaaaatggccaagatgattcccgtagttagaggaaaacccacaaaactc
aaggtaatgatttccgatgaaactccagaaccagaattcaaggccaaatatgataacgaa
cagcatgttcgtcgttggatagatatggctatgcgcattgagggaactaacaaaaccttc
ggtgttcatgcagcaggagtggtaatttcctccgagccattagatgaaattgtgccattg
cagaagaacaatgatggttcggttattactcaatattttatggaggatttggagtctcta
ggcttgttgaaaatggactttttgggtctgagaaatctgaccctaattcaaaaaactata
gatttaattgaacaaaaccgaggttatacaatagatccagatgatattacccgtcaagaa
agaaaagcccaaaaaatcttagcgaaaggtgaatatagcaccttgcctaaagatgtagcc
caagcctattctctgctggaatcaggagatctagagggtgtatttcaattagaatcttcg
ggaatgaaacaaattgttagagatctaaaaccctccaatattgaagatatatcttcaatt
ttagctctatatagacccggtcccctagatgctgggttgatacctaagtttattaatcgt
aaacatggtcgggaatctattgattacgaatcccagattttacaacccatactaaatgaa
acctacggaatcatggtctatcaagagcaaattatgaaaattgctcaagatatggctggc
tactctctcggacaagcagatctgctacgtcgtgctatggggaaaaagaaggtagcagaa
atgcaaaaacagcaggaaaaatttattgatggagcaacaaaaaacggggtcaaaaaacaa
gttgctgaacaattatttgcggatatgttaaaatttgctgagtattgtttgagttatgaa
acggaagttttaactctggagtatggatttgtgcccattggagaaattgtgaacaagcaa
attgcttgtacagtatttagtgtgaacgacagtggtaacgtctacacccaacctatcggt
caatggcatgatagaggggtacaggatttatacgaatactgtttagacgatggttcaaca
attagggcaactagggatcacaaatttatgaccacccaagggaaaatgctaccgattgac
gaaatatttgctcaaggttgggagctacttcaggtttctgggccatga
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