Raphidiopsis curvata: NIES932_09380
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Entry
NIES932_09380 CDS
T09812
Name
(GenBank) ABC transporter-like protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rcs
Raphidiopsis curvata
Pathway
rcs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES932_09380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcs02000
]
NIES932_09380
Transporters [BR:
rcs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES932_09380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_24
AAA_29
AAA_16
AAA_22
Secretin
AAA_18
AAA_23
AAA_33
MMR_HSR1
Dynamin_N
dNK
Motif
Other DBs
NCBI-ProteinID:
BAZ89459
LinkDB
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Position
999364..1001175
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AA seq
603 aa
AA seq
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MVKSRRLAQLGNYLRPHWKETLLGIVALLSVNGLGVYIPLLIRSGVSTLSTTFSFNQILY
YALVIILLSSAMWMMRMASRIWIFGVGRQVEFELKQRIFEHLLKMEPAYFTINPPGDLIT
RTTSDVENIRRLLGFAVLSLVNTVFAYSMTIPIMLSINIELTLAALVVYPVMLFLVHTFS
DRLREEQAAVQEKLSDISELIQEDMSGISLIKIYAQEENERRAFQNKNQALLKANLTLAK
TRSTLFPMIGGLANISSLIIIWLGTMRISSGNLAVGDFLALLIYVERLVFPTALLGFTIT
AYQRGEVSIDRLESIFSVTPQIKDGSETISLNINKVKGAISANNFSYTYPGSQVPALTGV
NFNINPGEMIAVVGAIGSGKSTLANALPRLLDIEEGQLFLDGWDITKISLNDLRAAIAYV
PQDSFLFSTSIRNNISYGDLVTQPEGLGSAANLAKNRLRGRFEQERVENVANLVHIAGEI
NNFPQQYDTLVGERGITLSGGQRQRTALARAILVDAPVLILDDALSSVDNETATQILQNL
AQGKKRKTVIFITHQLAAAAGADRIIVMEKGEIVQIGKHSDLLQQPGLYQKLWSQHQMEQ
LLQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaatctcgaagacttgctcaacttggtaattatttacgtccccattggaaagaa
acattattgggtattgttgctctgttgtctgtcaatggcttaggagtctatatacctctg
cttatccgctctggtgtttctactctatccactacttttagctttaatcaaattctatat
tatgcattagttattattctgctcagttccgccatgtggatgatgcgtatggcttcccgc
atctggattttcggtgttggtcgtcaggtagaatttgaactaaaacagcggatttttgaa
catttactcaagatggaacccgcttactttactattaaccctcctggggatttgattact
cgaactaccagtgatgtagaaaatatccgcagacttttggggtttgcagtattaagcctg
gtaaatactgtattcgcctattctatgaccataccaatcatgctatctatcaacatagag
ttgaccttagcagctttggttgtttatccggtaatgttatttttagtgcatacttttagc
gatcgccttagggaagaacaagcagcagtacaggaaaaactttcggatataagtgaatta
attcaggaggatatgagcgggatttcattaattaaaatctatgctcaagaggaaaatgaa
cgtcgggccttccaaaataaaaaccaggctttactaaaggcgaatttaacactggctaaa
actagaagtaccctgttccccatgattggtggactggcaaatatcagttccctgatcatt
atttggttagggacaatgcgcatatcttcggggaatttagcggtgggagattttttagct
ctcttgatttatgtggaacgattagtttttcctactgcgctactaggttttacaattact
gcttaccaaaggggtgaagttagcattgataggctggaatctattttcagtgtcactcct
caaattaaagatggatcggagacaatttccctaaatataaataaggttaagggagcaatc
agcgccaataattttagttatacctatccaggtagtcaggttcctgctttgacaggcgtt
aactttaatattaatccgggggaaatgatcgcagttgtgggagcaattggctctggtaaa
tcaactctagctaatgcgttacctcggttactagacattgaagagggacaattattcttg
gatggatgggatattacaaaaatatcattaaatgatttgcgagctgcaattgcttacgta
ccacaggatagttttttgttcagcactagtattaggaataatatctcctatggtgacctt
gtaactcaaccagaaggattgggtagtgctgccaatttagccaagaatagacttaggggt
aggtttgaacaagaaagggtagaaaatgttgctaatctggttcatatcgcaggagaaatt
aataactttcctcaacaatatgacaccctggtaggtgaaagggggatcactctatcggga
ggtcaaagacaacgcactgctttagctagagccatattagttgatgctccggtattaatt
ttagatgatgctctttctagtgtggataatgaaacagctacccagattctgcaaaacctt
gcccagggtaaaaaacggaaaactgtaattttcatcacccatcaacttgctgctgctgct
ggtgctgatagaattatagttatggaaaagggtgaaattgtgcaaattggtaaacactcg
gatttgttacaacaacctggactataccaaaagttatggagtcagcatcaaatggaacag
ttattgcaataa
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