Raphidiopsis curvata: NIES932_12050
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Entry
NIES932_12050 CDS
T09812
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
rcs
Raphidiopsis curvata
Brite
KEGG Orthology (KO) [BR:
rcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcs03000
]
NIES932_12050
Transcription factors [BR:
rcs03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NIES932_12050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
PBP_like_2
HTH_30
Motif
Other DBs
NCBI-ProteinID:
BAZ89722
LinkDB
All DBs
Position
1248469..1249383
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AA seq
304 aa
AA seq
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MNQATLHQLKVFEAAARHGSFTRAAEELFLTQPTVSMQIKQLTKSVGLPLFEQVGKRLFL
TEAGRELFATCREIFNVISQFEITVADLKGLKQGSLRLAVITTAKYIIPRLLGPFCELYP
GIDVSLQVTNHEGILERMTANLDDLYIMSQLPEHLDIQFQPFLENPLVVFAPVNHPLSTE
TNISLERLAQEPFIMREPGSGTRRAIQSLLEENGIKVKVKLELGSNEAIKQAIAGGLGIS
VLSRHTLLSDAHQFSILDAQHFPIKRTWYIVHPSGKQLSIVARTYYEYLLGAAKRIVEEE
IIQS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
ttgaaccaagcgacactgcaccagttgaaggtgttcgaggccgctgcaagacacggcagc
tttacccgtgctgcagaggaactatttcttacccaacctactgtctccatgcagatcaaa
caactgactaaatccgtgggtttaccattgtttgaacaggtgggtaaacgcttatttttg
accgaagctggaagggaattatttgccacctgtcgtgagatttttaatgttatttcccag
tttgaaataactgtagcagatcttaaaggactaaaacaaggtagcttacgtttggcagtc
attactactgccaaatacattattccccgtttattgggacctttttgtgaactttatcca
ggaattgatgtttccctacaggtaacaaaccatgaaggcatcttggaacggatgactgcc
aatttggatgacttgtatattatgagtcaactgccagagcatttggatattcagtttcaa
ccttttttagagaatcccctagtggtttttgcacctgtgaatcatcctttgtctacggaa
accaacatttctttggaaagattggcacaggaaccatttattatgcgcgaacctggttct
ggtactcgccgtgccatccagagtttattagaggaaaatggtattaaagtcaaggttaaa
ttagaactgggtagtaatgaagcgattaagcaagccatcgctggaggtttagggatatcg
gttttatcccgtcataccttattgagtgatgcccaccaatttagtattttggatgcacaa
cattttcctatcaaacgtacctggtatatagttcatccttccggtaagcagttgtctatt
gtggctcgtacttactatgaatacctgttaggagcggcaaaaagaattgtcgaagaggaa
attatccaatcatga
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