Raphidiopsis curvata: NIES932_15160
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Entry
NIES932_15160 CDS
T09812
Name
(GenBank) WD-40 repeat protein
Organism
rcs
Raphidiopsis curvata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WDR55
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_Vps41
ANAPC4_WD40
Ge1_WD40
nSTAND1
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
eIF2A
RMC1_N
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Bflower_3
PROPPIN
Beta-prop_Nup120_160
AAA_16
AAA_22
ATPase_2
NACHT
Motif
Other DBs
NCBI-ProteinID:
BAZ90029
LinkDB
All DBs
Position
complement(1632048..1636073)
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AA seq
1341 aa
AA seq
DB search
MNDLENISNHHYEPIKTILRVINFSQGQFSLIFLHCNDAELREQVAAQLRERSPNKIEEI
TLPHSAISLYDNISLVLDRHPEVLMVFGLETVNNLDSILQFSNQIREEFRKNFAFPLLIW
IDDQILRKILRIAPDLETWGSIIGTPNYYNGENHVKSLAQIHRFLAEAALENQQWSEAKR
QAQYAQEVLNSVDHTILPDDGLYYLLIARSQVGLGETSAAIETLEIAKTHSEPTQDPQLY
IEILKTLASLYFDNANYLQAFYVRQEQLQVEQQYGLRGFLGSSYLNPQRPMINKTNGNGR
NGRPMAFGREEDIKRLWQRISDNEHPLVVIHGQFAVGKTSIIRGGLVPILEQELIDDRKV
LPIILREYTNWLEELSEQLLNKLEKKLQSTIAIETFNGLSLQERIIKLLNISGDKNLLTV
LIFDQFEEFFFVTSNLDQKRTFYHLLRSCLDIPFVKIILTLREEYLHYLLEIDRLVDLRV
TNNNILDKNIRYYLGNFSKAVAKGIIQMVKNQFELQTELIDQLVEELGDNLGEVRPLELQ
IVGAQLEKEGIDTLEQYEQFGGKQKLLEKFLQDVIKSCGPENESTAQLVLYLLTEENGTK
PLKNQAEITTQLSVESDKLDLVLKIFVCSGLVWLVRESPRDRYQLVHDCLVQFIRQQYVR
SYYTQLSAQLERIQAELRQEREAEEQAQLVTKLEEDALIALDQFQTDPLLSLVTAVSNGN
LLKSIVQNNPLDKYPTVRPIYTLNTILDAISDRNIIKGHEGGITSVCFSPDGQTIGTGSW
DKTVRLWNLRGENIQQFRGHEGGITSVCFSPDGQSIGTGSEDGTARLWNLRGENIQQFRG
HEGGITSVCFSPDGQSIGTGSEDGTARLWNLRGENIQQFRGHESGITSICFSPDGQSIGT
GSEDGTARLWNLQGENIQQFHGHEDWVTSVSFSPDGQILATTSVDKTVRLWNLQGETIQQ
FHGHENWVTSVSFSPDGQTIATTSVDKTARLWNLQGETIQQFHGHENWVTSVSFSPDGQT
IATTSVDKTARLWGLHRHKIQEIKGHEDWVTGVSFSPDGQTIATASRDSTARLWDLEGHL
IQQFKGHQSRVTSVNFSPDGQTIGTGSADKTARLWNLQGENIQEFQGHEDWVTSVSFSPN
GQTIATGSRDKIARLWSLQGDLLGEFPGHEDWVTSVSFSPNGQTIATGSADKIARLWNLQ
GENIQEFQGHEGGVTSVSFSPDGQTVVTGSVDKTARLWSLKGYLIREFKGHDSGITNVSF
SPDGQTLATASVDKTVRLWDLKGELIQEFKGYHDTVTSVSFSPDGQTLATASLDKIARLW
PIRYLDRALKDGNTWLTGTNF
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatctagaaaatatttccaatcatcactatgaacctatcaaaaccatcctacga
gtaattaatttttcccaaggtcaattttccctgatttttttgcactgtaatgatgctgaa
ttacgcgaacaagtagcagcacaattgcgggaaagatcgcccaacaaaattgaggaaatt
actctacctcattccgccataagtctgtatgataatatatccctagtcttggatagacat
ccagaagtcttgatggtctttggactggagactgttaacaacctggactctatcttacaa
ttctctaaccaaattagagaagaatttagaaaaaactttgcctttcctctattgatttgg
atagatgatcaaatactgagaaaaattttgagaattgctccagatttagaaacttggggt
agtattattggcacacctaattactacaatggagaaaaccacgtgaaaagtttggctcaa
attcacaggtttttggcagaagcggctttagaaaatcaacaatggtcagaagctaaaagg
caggcacagtatgcacaagaagttttaaacagtgttgatcacacaatcttgccagatgat
ggtctatattacttattgattgctcgttcccaagttggcctaggagaaactagcgcggct
attgaaactttagaaatcgctaaaactcatagtgagcctactcaggatccccaactctac
attgagattttaaaaactttggctagtttatactttgataacgctaattacttacaggca
ttctatgttcgacaagagcaactacaagttgaacaacagtacgggttaagaggattcctg
ggatcatcgtatttaaatccccaacggccaatgattaataagactaatggcaatggtcgc
aatggtcgtcccatggcatttggtagggaagaagatatcaaaaggttgtggcaaagaatc
tcagacaatgaacatccattagtcgtgattcatggacaatttgcagtaggtaaaacctca
attattcgggggggactagttcctatcctggaacaggaactcatcgatgacagaaaggtg
ttacctattattctgcgggagtacacaaattggttagaagaattatcggagcaattatta
aataaactagagaagaagttacaatcaactatagccatagaaacatttaatggattatct
ctacaggagagaattattaaactattaaacatcagtggcgataaaaatttattaacggtt
ttgatatttgaccaatttgaagaatttttctttgtcaccagtaacctggatcaaaaaaga
acattttatcacttattacgctcttgcctagatattccctttgttaaaattatccttacc
ctccgggaggaatacttacattacctactggagatagacagactagtagatttaagagtt
actaacaataacattcttgacaaaaatattcgttactacttaggtaacttctctaaagca
gtggctaaagggattattcaaatggtcaaaaaccaatttgagttacagacagaattaatt
gaccaattagttgaagagttgggggacaatttaggagaggttagacccctagagctacaa
attgttggtgcacaattagaaaaggagggaattgatactttagagcaatatgaacaattt
ggtggtaaacagaaactactagaaaaattcttgcaggatgtgattaaaagttgtggacct
gagaacgagtcaacagctcaattagttttatacttgctcacagaggaaaatggaactaaa
cccttaaaaaatcaagcggaaataacaacacagttgtcagtggaaagtgataaactagat
ttggttttaaagattttcgtttgttcaggtttagtatggctagtgcgagaatcaccgagg
gatagatatcaactggttcacgactgtttagtgcagtttattcgtcagcagtatgtacgt
tcatattatactcagttatcagcacaattagagagaattcaagcagagcttagacaagaa
agggaagctgaagaacaagctcagctggtaactaagctggaagaagatgcactaattgct
ttagaccagtttcaaactgaccctctactatccctggttactgctgtaagtaatggtaac
ttattaaaatccatagttcaaaacaatcctctggataagtacccaaccgttcgtcccatt
tatacattaaataccattcttgacgccatcagcgatcgcaacatcatcaaaggtcatgaa
ggtggaattacaagtgtctgttttagtccagatggacaaactatagggactggttcctgg
gacaaaacagttcggttatggaatttgcggggtgaaaacatccagcagtttcgtggtcat
gaaggtggaatcacaagtgtgtgttttagtccagatggacaaagtatagggactggttct
gaggatggaacagctcggttatggaatttgcggggtgaaaacatccagcagttccgtggt
catgaaggtggaatcacaagtgtgtgttttagtccagatggacaaagtatagggactggt
tctgaggatggaacagctcggttatggaatttgcggggtgaaaacatccagcagttccgt
ggtcatgaaagtggaatcacaagtatctgttttagtccagatggacaaagtatagggact
ggttctgaggatggaacagctcggttatggaatttgcagggggaaaacatccagcaattt
catggtcatgaggactgggttacaagtgtgagttttagtccagatggtcaaatcctagct
accacctctgtggacaaaacagttagattatggaacttgcagggagaaaccattcaacaa
tttcatggtcacgagaactgggtcaccagtgtgagttttagtccagatggtcaaaccatc
gctaccacctctgtggacaaaacagctagattatggaacttgcagggagaaaccattcaa
caatttcatggtcacgagaactgggtcactagtgtgagttttagtccagatggtcaaacc
atcgctactacctctgtggacaaaacagctcggttgtggggattacatagacacaagatt
caggagattaagggtcatgaggattgggtcaccggtgtgagttttagcccagatggtcaa
actattgcaactgcttcccgggacagcacagctcggttgtgggatctggaaggtcatctg
attcaacaatttaaaggtcatcaaagtcgagtcaccagtgttaatttcagcccagacgga
caaaccattggcacaggttctgctgataaaacagctcggttgtggaatttgcagggggaa
aatattcaagaatttcaaggtcatgaggactgggttacaagtgtcagtttcagtcccaat
ggtcaaaccatcgctactggttcccgggacaaaatagccaggttatggagcttgcagggt
gacctccttggagaatttccaggtcatgaggactgggttacaagtgtcagttttagtccc
aatggtcaaaccatcgctactggtagtgctgacaaaatagctaggttatggaatttgcag
ggggaaaatattcaagaatttcaaggtcatgagggtggggttacgagtgtcagttttagt
ccggatggccaaaccgttgttaccggttcagttgacaaaacagctcgtttatggagctta
aagggttatctgattcgggaattcaagggtcatgatagtgggataacaaatgtgagtttc
agtcccgatggccaaactcttgctactgcttctgttgataaaacagtccgtttgtgggac
ttaaagggtgagctgattcaggagtttaagggttatcatgatacggttacaagtgtgagt
tttagccccgatggccaaactcttgctactgcttctttggataaaatagcccgtttatgg
cccatacggtatttggatagagctttgaaagatggaaacacctggttaactggcactaat
ttttga
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integrated database retrieval system