Raphidiopsis curvata: NIES932_16730
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Entry
NIES932_16730 CDS
T09812
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rcs
Raphidiopsis curvata
Pathway
rcs03420
Nucleotide excision repair
rcs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NIES932_16730
03430 Mismatch repair
NIES932_16730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcs03400
]
NIES932_16730
Enzymes [BR:
rcs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIES932_16730
DNA repair and recombination proteins [BR:
rcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NIES932_16730
MMR (mismatch excision repair)
Other MMR factors
NIES932_16730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
DEAD
ResIII
AAA_30
Terminase_6N
DUF1978
Motif
Other DBs
NCBI-ProteinID:
BAZ90177
LinkDB
All DBs
Position
complement(1792797..1795136)
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AA seq
779 aa
AA seq
DB search
MHINTNNDLTSQLNFSQRIAVEHYCGPLLVVAGAGSGKTRALTYRIANLILQNRVHPENI
LAVTFTNKAAREMKDRIQRLFADQFAINQYGQKLDLLPAQQQNEVISSVYRTYIKNIWCG
TFHSLFSRILRFDVEKYQDEKGRHWQKNFSIFDESDVQTLIKEIVTKQLNLDSKKFDPKS
VRYAISNAKNQGLSPREFEEQQPNYRGRVIGEVYNLYQDQLAANNSLDFDDLILVPTRLF
GQNEQVLGYWHNKFRHILVDEYQDTNRTQYELLRLLVTNGECRKNQWNWDNRSVFVVGDA
DQSIYSFRMADFTILLEFQQDFGDGLDDDDTRTMVKLEENYRSCENILQAANELIENNTE
RIDKILKATRDVGESIYFHKADDEVAEADFVINQIRNLTTNNPDITWGSFAILYRTNAQS
RPFEELLVKYQIPYTVVGGMKFYDRKEIKDVIAYLRAINNPADTVSLLRVINTPRRGIGK
STIDALINASQQLGTTLWEILSDETSVNTLTGRAAKSVTGFTSMIKKWQEQTTQVPASEV
LEGILEDSGYVRDLIDQGTDEADNRVSNVKELYNAVSQFQDENRGTDISLQAFLQSAALS
SDLDDLSEARDAVSLMTLHASKGLEFPIVFLVGLEQGLFPGYRSLQDPKSLEEERRLCYV
GITRTQERLYLSHARERRLYGSREPALPSQFLGELPQHLLTTKSKIRAARSIKSTTITPE
TSGETNNWRVGEQVLHKAFGKGVITHVFGSDEKISLAIKFTSLGQKIIDPKVAQLQKIN
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgcatataaacacaaataatgaccttactagtcagctcaactttagccagcgtatagca
gttgagcattattgcggtcccttactagttgttgctggtgcaggttcaggtaaaacccgc
gccctaacctataggattgctaatttaattttacaaaaccgtgtgcaccccgaaaacatt
ttagcagtaactttcaccaataaagctgcaagggaaatgaaagaccggatccaaagatta
ttcgcggatcaatttgccataaatcaatatggtcagaaattagatttattgcccgcacaa
caacaaaacgaggtcatatcaagtgtttaccgtacctacattaaaaacatctggtgtgga
accttccatagtttattttcccggattttgagatttgatgttgaaaaatatcaagacgaa
aagggccgacactggcagaagaacttttctatctttgatgaatctgatgtacaaacttta
attaaagaaattgtcacaaaacaacttaacctagacagtaaaaagtttgaccctaaatcc
gttaggtatgccattagtaatgctaaaaaccaaggtttatcaccacgagaatttgaagaa
caacaacccaactatcgtggtcgagtaattggggaagtttataacctttatcaagatcaa
ctagcggccaataacagtttggattttgatgacttaattctagttcccactagactattt
gggcaaaatgagcaggttttgggctattggcataacaagttccgtcatattctagtagat
gaatatcaggatacaaatcggactcaatatgaactactgcgtttattagttaccaatggt
gaatgtcgcaaaaaccaatggaattgggacaatcgttcggtgtttgtagttggtgatgca
gaccagtctatttatagttttaggatggctgattttaccattctcttggagtttcaacag
gattttggagatggtttagacgatgatgacaccaggactatggtgaaactagaggaaaac
tatcgctcctgtgaaaatattctgcaagctgctaatgaactgattgaaaataataccgaa
cgcattgataaaatcctcaaagctacgcgagatgtgggcgagtctatttattttcataaa
gccgatgatgaagtcgctgaagcggattttgttatcaatcaaattcggaatttaacaact
aataaccctgatattacttggggaagttttgccattctctatcgcactaatgcccaatct
cgaccgtttgaggaactgctggtaaaatatcaaatcccctacaccgtggtgggagggatg
aagttttatgaccgaaaggaaatcaaagatgttattgcctatttaagagcaattaataat
cctgcagatacggtaagtttattaagggtgattaatactcctagacgaggtattggtaag
tctaccatagatgccttgattaacgcttctcaacaattgggtacgaccttatgggagata
ttgagtgatgaaacttctgtaaacaccttgaccggacgtgcagcaaaatctgtaactggt
tttactagcatgattaaaaaatggcaagaacaaaccactcaagttcccgcatcggaggtc
ttggaaggaattctggaagattctgggtacgtccgagatttaatagaccagggaacagat
gaagctgataatagggtcagcaatgttaaggaattatataatgctgtatcccagttccaa
gacgaaaacaggggtactgatatttctttacaagcatttttacaaagtgcagcattaagt
tcagatttagacgatttaagcgaagccagggatgcggtttctctgatgaccctgcacgct
tctaaagggttggagttccccatagtgtttttagttggtttagagcagggactatttccc
ggttatcgttctctacaagatcctaaatctttagaagaagaaagaagattatgttatgtg
ggaattacccgtacccaagagcgattatacctatcccacgctagagaaagaaggttatat
ggctctagagaaccagcattgccatcacaatttctgggagaactaccccagcacctatta
actactaagtcaaaaatccgtgctgctaggtctattaaatccacaacaatcacgccagaa
acttctggagaaactaacaactggcgtgttggtgaacaagtactgcacaaagcttttggc
aaaggtgtaattactcatgtttttggcagtgacgaaaaaatatccctggcaattaaattt
accagtttgggtcaaaaaattatcgaccccaaggtagcacaactgcaaaaaataaactaa
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