Raphidiopsis curvata: NIES932_18630
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Entry
NIES932_18630 CDS
T09812
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rcs
Raphidiopsis curvata
Pathway
rcs00300
Lysine biosynthesis
rcs00470
D-Amino acid metabolism
rcs01100
Metabolic pathways
rcs01110
Biosynthesis of secondary metabolites
rcs01120
Microbial metabolism in diverse environments
rcs01230
Biosynthesis of amino acids
Module
rcs_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rcs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NIES932_18630
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NIES932_18630
Enzymes [BR:
rcs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NIES932_18630
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAZ90364
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All DBs
Position
1985396..1986802
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AA seq
468 aa
AA seq
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MVSTYPVKVQPSGHQYLSIVDVPTSVSPNQQLLPVSAKVIDHDFLEIGGCDVKTLVQQFG
SPLYILDELTVRTACQQYRDAFNKYYKGQSQVLYASKAWNCLAVCAIVASEGLGIDVVSG
GELYTALAGGMSADKIYLHGNNKSYHELIFAVETGCTIVVDNWYELKTLVAILEQDEQDQ
AKKIRIMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLPEVFSFVSQQSRLHCVGVHAHI
GSQIFERQPHRDLAAVMVQWLREAKQYNLELAELNVGGGLGIKYTESDDPPSIEEWSRAI
CEVVQNVCAEENLPLPKLLCEPGRSLIATAGVTAYTIGSTKTIPDIRTYVTIDGGMSDNP
RPITYQSVYRAVVANKMSAPLTETVTLAGKHCESGDILIKNVQLPKTEPGDVLVVMTTGA
YNYSMASNYNRLPRPAAVLVANGEANLILQRETYQDIIRQDCLPERLK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggtatcgacttaccctgtcaaggttcaaccttccggtcatcagtatctatctattgta
gatgttcctaccagtgtttctcctaatcagcaacttctacctgtaagtgccaaagttatt
gatcatgatttcctggaaattggcgggtgtgatgttaaaactctggtccaacagtttggc
tctcccctctatatcctcgatgaactaactgtgcgcaccgcttgtcaacaatatcgagac
gcctttaataaatattacaaaggacaatcccaagtattgtatgcttctaaagcatggaac
tgtttagcagtttgtgccattgttgcttcagaaggtttaggaatagatgtggtatctggt
ggggaactttacactgctttagctgggggtatgagtgcggacaaaatctaccttcatggc
aataataaatcttaccatgaactgatttttgccgtggagacaggctgcacaattgtagtt
gataactggtacgaattaaagactctggtagctatcctagagcaggatgaacaggaccag
gctaaaaaaatcaggatcatgttacggttaaccccgggaattgaatgtcatacccatgaa
tatatccgtactggacatttagatagcaaatttggttttgaccccaatgacttaccagag
gtatttagctttgtcagtcaacagtcaaggctacactgtgtgggtgtacatgctcacatt
ggttcccaaatttttgaacgtcaaccccatcgagatttagccgctgtaatggtacagtgg
ttgcgtgaagcaaaacaatacaatctagaattggcagagctaaatgttggtggtggtctg
ggaattaagtataccgagtccgatgatcccccaagtattgaagaatggtctagggcaatt
tgtgaagtagttcaaaatgtttgcgctgaagaaaacttacccttacctaaacttttgtgt
gaacccgggcgatcgcttattgctacagctggtgtaactgcttacactattggttcaact
aagaccattccggatattcgtacctatgtaacaattgacggagggatgtccgataatccc
cgtccaattacatatcaatcagtttatcgagcagtggtagccaataaaatgtctgccccc
ctgacagaaacggttacattagcgggtaaacactgtgaatcgggagatattctgattaaa
aatgtccaactgccaaaaactgagccaggggatgtgctggtagttatgacaacgggagca
tataattacagtatggcctccaactacaatcgtttaccccgtccagcagctgttctagta
gccaatggagaggcaaatttaattttgcaacgggaaacctatcaagacatcatccgacaa
gattgtttaccggaaagactcaaataa
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