Raphidiopsis curvata: NIES932_20210
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Entry
NIES932_20210 CDS
T09812
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rcs
Raphidiopsis curvata
Brite
KEGG Orthology (KO) [BR:
rcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcs03400
]
NIES932_20210
DNA repair and recombination proteins [BR:
rcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NIES932_20210
Archaeal homologous recombinant proteins
NIES932_20210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
Rad50_zn_hook
AAA_27
AAA_29
AAA_21
DUF1664
ABC_tran
HB_LcnD
Mut7-C
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BAZ90521
LinkDB
All DBs
Position
complement(2172735..2175752)
Genome browser
AA seq
1005 aa
AA seq
DB search
MIPVRLILKNFLSYRDATLDFTGLHTACICGPNGAGKSSLLESITWAIWGQSRANIEDDV
IYAGSQEVRVDFTFYNNLQKYRVIRTRTRGATGILEFQMETPAGFRPLTGKGIRATQNLI
LQHIKLDYETFINSAYLRQGRADEFMLKGPAQRKEILAELLKLNQYDLLEERAKDNSKQC
KGRVEELERSIHHIQLQLTDRETIQTQRVTLETRLHHLQQQQTSDYQQLQDLQVVERQRH
DWETKLGVVQQQCQNLVSECDRLYQDSSIVKSQLEELDSILGQSEEIQAGYLGFQALQSQ
EESFTRKFEQHNLAISCKQSREQELMTRVQAIQLQIQQESVELKASEKQEQELQGCLHKS
GEVETALSSLSAAREHLNQMDQLQVQVTPLLQERASLQSQIDRVYATLSAKLEGLENTRQ
QLQSKDSDFSRLQESAAQLDKQIEELEKKRVYLQRVHEKGNDRRHVIERLQTHQTEYEKS
LGKLEQKIQLLQEPNALCPLCERPLDEHNWSRVVEKTQGEYKDTQEQFWQTRELLAVSDQ
EIQALRTEYQTISRQVAEYESLRQKKGELGAHLQAMIDDRERLKQLTAEKESLQAKLQGN
YAPELQQELQEVDQHLQQLNYQEESHALARSEIERWRWAEIKQAQIKDAQKKIAQLAQIK
PKLVAKIEELQAQVLWEQTNSPIAQEIRGLAVDIAAIGYSHEAHQEIHKKVQGSQHWQLK
HQQLLSAQQQYPYLEKRLADLSSDLQQREALKQKVTMEIGEIEKQLASMVNPREKIADLD
QKMVFRRREMDETITHLGRLEQKLHQLEMLQNQYEQEKEQLAICKKQQRVYQELAQAFGK
NGIQALMIENVLPQLEAETNKLLSRLSGSQLHVQFITQKLGSKSAKKGAKLVDTLEILIA
DTRGTRAYETYSGGEAFRINFAIRLALAKLLAQRAGAALQLLIIDEGFGTQDTEGCDRLI
ASINAIASDFACILTVTHIPHLKEAFQARIEVNKNQQGSHLSLSI
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgattccagttcgactgattctaaaaaactttttgagttaccgtgatgcaactttagat
tttacgggattgcacacggcctgcatttgtggtcctaatggagcaggtaaatcttctttg
ttggagtctataacctgggcaatctggggtcaaagtcgtgccaacattgaggatgatgtt
atctatgctggatcacaagaggttagggttgattttaccttctacaacaatttacaaaaa
tatcgggtaattcgtacccgtacccgaggtgctacgggtatcttggaatttcaaatggaa
acccctgctggttttcgtcctcttacgggtaaggggatccgtgctacccagaacctgatt
ctccaacatattaagttggattatgaaacttttattaattcggcttacctccgtcaagga
cgcgctgatgaatttatgctgaaaggacctgctcaacgcaaggagattttggcggagttg
ttaaagctcaatcagtatgatttgttggaggaaagagctaaggataattctaagcagtgt
aagggaagggtggaagagttggaacgttctatccaccacattcaattacaattgactgac
agggaaacaattcaaacccaaagagtaactttggaaaccagattacatcatctgcaacaa
caacagacttctgattatcaacagttgcaagatctccaggtggttgaacgtcaacgtcac
gactgggaaaccaagttgggagtagttcaacaacagtgtcagaatctcgtttcagaatgc
gatcgcctttatcaagatagttcgattgtcaagtctcaattggaggagttggattctatt
ttaggtcagtctgaagaaattcaagctggttatcttggttttcaagctctacaatctcag
gaagagtcttttactagaaaatttgagcaacataatcttgctattagttgtaaacaatca
cgggaacaggaactcatgacacgagttcaggccattcaactgcaaatacaacaggagtcg
gtagaattaaaggcctcggaaaaacaggagcaggaattacaagggtgcttacacaaatct
ggagaagtggaaacggctttgagcagtttatctgctgctcgtgaacatcttaaccagatg
gatcagttacaagtccaggtgactcccctcctacaagaacgagcaagtttacaaagtcag
atagaccgggtttatgccactttgtcagctaaattggaggggttggaaaatactcgacaa
caactacaatctaaagattctgacttctctcggttacaggagtccgctgcacaactggat
aagcaaattgaggagttggaaaagaaacgtgtctatcttcaaagggtacatgaaaaagga
aatgatcgtcgccatgtaattgaacgtttgcaaactcatcaaactgaatacgagaaatct
ttgggtaagctggaacaaaagatacagctacttcaggagcctaatgctctatgtcctctc
tgtgaacgtcctttagatgagcataattggagtcgggttgtagaaaaaactcagggagaa
tacaaggatactcaggaacaattttggcaaacacgagaattattggcagtgtctgaccaa
gaaattcaagcattaaggacggaatatcagacaatctcccgacaggtggcagaatatgag
tctttaaggcaaaaaaaaggagaattaggtgctcatctgcaagctatgatcgatgaccgg
gaaaggttgaagcaacttaccgcagaaaaggaaagtttacaggctaaattacaagggaat
tatgctccagaactacaacaggaactccaagaagtagatcagcatttacaacagctaaat
tatcaggaagaaagtcacgctttagctagaagtgagatagagcgttggcgatgggcagaa
attaaacaggctcagattaaagatgctcaaaagaaaatagctcaactagcacagattaag
cctaaactagtagccaagattgaggagttacaagcacaagtgctatgggaacagactaat
tcaccaatagctcaggaaattaggggattagcagtggatattgctgctattggttatagt
catgaagcacatcaggaaattcataaaaaagttcaagggagtcaacattggcaattgaaa
catcagcagttgttatctgctcaacaacaatatccttatctggaaaaaagactggcagat
ttgagtagtgatttgcagcaaagagaggcgctaaaacaaaaagttaccatggaaataggt
gaaatagagaagcaattagcctctatggtcaatccaagagagaaaattgctgatttagac
cagaagatggtatttcgtcgtcgagaaatggatgaaactatcactcatttaggcaggttg
gaacaaaagctacatcagttagaaatgctgcaaaatcaatatgagcaagaaaaggaacaa
ttagcaatttgtaagaaacaacagcgcgtttaccaggaattggcgcaggcttttggtaaa
aatggtatccaagcactgatgattgaaaatgtgttaccacaactggaagcagagactaac
aagttactttctcggttgagtggtagtcagttacatgtacagtttattacccagaagttg
gggagtaaatcagctaagaaaggcgctaagttggtggacactttagaaattttaattgct
gacaccagaggtacaagagcttatgaaacttactccggaggggaggcgtttagaattaac
tttgccattcggttagcattggctaaattgctggcccagcgtgctggcgctgcactacag
ttgttaattatagatgagggatttggcacccaagatacggaaggatgcgatcgcctgatt
gcttccattaacgcaatagcgagcgattttgcctgtattttgactgtgacccatattccc
catctcaaggaagcgtttcaggcgcgaatagaagtaaataagaaccaacagggttcccat
ttatccctctcaatttga
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