Raphidiopsis curvata: NIES932_21400
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Entry
NIES932_21400 CDS
T09812
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
rcs
Raphidiopsis curvata
Pathway
rcs02010
ABC transporters
rcs03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rcs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES932_21400
03070 Bacterial secretion system
NIES932_21400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcs02000
]
NIES932_21400
02044 Secretion system [BR:
rcs02044
]
NIES932_21400
Transporters [BR:
rcs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES932_21400
Secretion system [BR:
rcs02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NIES932_21400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
cNMP_binding
SMC_N
AAA_22
DUF87
AAA_29
AAA_16
AAA_23
AAA_30
KAP_NTPase
RsgA_GTPase
nSTAND3
DUF3987
Motif
Other DBs
NCBI-ProteinID:
BAZ90638
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All DBs
Position
2309143..2312142
Genome browser
AA seq
999 aa
AA seq
DB search
MNYSSQEFSEFLQKIPGFEKLSPTEINHLLSKQQALRYRLGQKIIGKEQLPERIVILYQG
KVRLLGYHPQSQLPITLKMLEPGAVIGEISYLRQIACEAAIASTEVICLTWNPIDYLSVF
SQNSDFAKERQEENHIIEVFDVISHHVAQKAYGNLNLKDITRDILPESKIQYLPPGKTPL
EQLESDRTWFVSSGQITNFPVNSQIVSNNNREVLQVTGKSPARLLGINPQVLLLLEQQEN
RELEKIEDPSKDVIDIPVTTPAELSPQENKKAKSRKKQPKYPFFGGRDELDSTLACFQML
AKHFQVPLRKEVVRRILSDNLKRQGNVSFQLCAYVGEVIGLKSQLVDIYATKITEIQTPA
IIQHQDGYAVVYEADESRIVVAIPSQGIINYKPSKLLQQIPTDDTNLQPQIKVLQISPTS
ETPQERFGIRWFLPYLSRYRRVLIEVFIASFFVQLAALANPLVIQLIIDKVIVQNSISTL
NILGILLLAVGVFEAILTTLRTYLFVDTTNRIDMGLGSQIIDHLLRLPLRYFERRPVGEL
ATRVNELENIRQFLTGTALTVGLDAVFSVVYIVVMLFYSWELTLVGLGTIPLFVVITLIA
APTVSRQLRTKAERNATTQSYLVEVMSGIQTVKAQNIELRSRFSWQERYAKFVSAGFKTV
ITSTLANSTSQFLNKLSSLLVLWVGAYLVLQGQLTLGELIAFRIISSYVTSPILRLAQIW
QNFQETGLSLERLSDIVDTPQEAEVDKDNIPLPNVVGAVKYENVCFRFATNGPLQLNNVS
LDFPAGTFVGIVGQSGSGKSTMMKLLLRLYNIESGRIFIDGYDISKVELYSVRRQIGVVP
QDTLLFDGTVFDNIALTNPDATTEEVVEAAQIAVAHEFIMGLSNGYNTKVGEKGSNLSGG
QRQRIAIARSILQKPKILVLDEATSALDYPTERQICLNLAKAFRGKTVFFITHRLNTVSN
SDTIVVMDGGRVVEQGSHQELMTAKGHYSYLYQQQEVNL
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaactacagcagtcaggagttttcggaatttctgcaaaaaattccggggtttgaaaaa
ttatccccaacggaaattaaccatttattgtcaaaacaacaggccctccgttatcggttg
ggtcagaaaattatcggtaaggaacaactaccggaaaggatagtaattctttaccaaggt
aaggtaagactgttaggatatcatccccaaagccaattgccaattaccctcaaaatgttg
gaaccaggagcagtaattggcgaaattagttacctgcgacagatagcatgtgaagcggcg
atcgcctcaacggaggtaatatgtttaacctggaaccccatagattatctgtcggtattt
tctcaaaactctgattttgccaaggagcgtcaagaagaaaatcacatcatagaggttttt
gatgtgattagccatcatgtagctcaaaaagcctatggaaatctgaatttgaaggatata
acccgagacattttaccagagtctaaaatccaatatctaccaccaggaaaaactccatta
gagcaactagaaagtgatagaacctggtttgtgagtagtggtcagattacaaatttccct
gtgaattctcagatagtatcaaataacaatcgagaggttttacaagttacaggaaaaagt
ccagcccggttattaggtattaatcctcaagtgttattgttgttagaacaacaggagaat
agggaactagagaagatagaagatccatccaaagatgttatagatattcccgttaccaca
cctgcagaattatccccccaggaaaataaaaaagcaaaatccagaaaaaaacagccgaaa
tatcctttttttggggggcgggatgaactagattctaccttggcttgctttcagatgctg
gcgaaacatttccaggttcccctgcgtaaggaggtggttcgtaggattttaagtgataac
ctcaaacgccaaggtaatgtatcttttcaactttgcgcctatgtgggagaagtaattggg
ttaaaatcccagttagtagatatttatgccactaaaattacggagattcagacaccagct
attatccaacaccaggatggttacgctgtggtttatgaagcggatgaaagtagaatagtt
gtagctattccatcccagggaataatcaactataaacccagcaaactcctacagcaaata
ccaactgatgatactaatctgcaacctcaaatcaaagtcctccagattagtcctacctct
gaaacccctcaagaacgctttggaatacgttggtttctcccctacttatcacgttaccgc
cgggttttaatagaagtctttattgcttcatttttcgtacaactggccgcattggcaaat
ccactggttattcagttaattatcgataaagtcatagtacaaaatagtattagtaccctg
aatattttggggattttactattagcggttggtgtgtttgaagccatattaactacttta
cgaacctatttatttgtggataccactaaccgaattgatatgggtttgggttcacaaatt
attgaccatttactcagactaccactgcgttattttgaacgcagacccgtgggggaatta
gctactcgagtgaatgagttggaaaatattcgccagttcctcacaggaacagctttgaca
gttggactagacgcagtattttcggtggtttatatcgtcgttatgctgttctatagttgg
gaactaactctggtgggactgggaactattcccctctttgtggtgattacattaattgct
gctcctaccgttagccgacaattgcgcaccaaagcagaacgcaatgccactacccagtcc
tatctagtggaggtaatgtctggtattcaaacggtaaaggcgcaaaatattgaactgcga
tcgcgcttttcttggcaagagcgttatgccaagtttgtttccgcaggttttaaaacagtt
attacatcaacattagccaattctaccagtcagtttctcaataaactaagtagcttatta
gtactgtgggtaggggcttatttagttttacaaggacagttaactctaggggaattaatt
gcctttagaattatttctagttatgttactagtcccatactaagactagcccaaatctgg
caaaacttccaagaaacaggtttgtccttagagagattgagcgatattgtggacacacct
caggaagcagaagtagacaaagataatattcccctacctaatgttgttggtgcagtcaaa
tatgaaaatgtttgcttccgctttgcgaccaacggacccctgcaactaaataacgtcagt
ttagattttccagcgggcacatttgtgggtattgtgggacaaagtggctcaggaaaaagc
accatgatgaaattactcctcagactttataacattgagtctgggagaatttttattgat
ggttacgacatcagcaaggttgagctttattccgtcagaagacaaatcggcgtggtcccc
caagataccctgttatttgatggaacagtattcgataatatagccctaaccaatcctgac
gctaccacagaggaagtggtcgaagcagctcaaatagcggttgctcatgaatttatcatg
ggtctatccaatggttataacaccaaagttggggaaaaagggtcgaacctgtctggagga
caaagacaaagaattgccattgctcgttccatactgcaaaaacctaaaatattagtttta
gacgaagccacaagtgccctagactatcccacagaaaggcaaatatgtttaaatttagcc
aaggcatttcgtggcaagacagttttcttcattacccatcgtctcaataccgtcagtaat
tcagatacgattgtagttatggatgggggtagagtggtagagcagggtagtcatcaggaa
ctaatgactgctaaaggacactattcctacctttaccagcaacaggaagtcaacctctaa
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