Raphidiopsis curvata: NIES932_23490
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Entry
NIES932_23490 CDS
T09812
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rcs
Raphidiopsis curvata
Pathway
rcs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NIES932_23490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcs03400
]
NIES932_23490
Enzymes [BR:
rcs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NIES932_23490
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NIES932_23490
DNA repair and recombination proteins [BR:
rcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NIES932_23490
BRITE hierarchy
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zinc-ribbons_6
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BAZ90844
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All DBs
Position
2541362..2542195
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AA seq
277 aa
AA seq
DB search
MPELPEVETVRRGLNQLTLHQPITGGDVLLASTVAYPFAADQFIGDLKGNTIESWIRCGK
YLLAELSSSAWLGVHLRMTGQLLWLSQEESLHKHTRVRLFFGKEQELRFVDQRTFGKMWY
VPSGVVREEIITGLGKLAIDPFAVEFTPEYLATKLAKVRRPIKTALLDQSIVAGLGNIYA
DEALFKSGILPTTISTNIDKKQIRSLRMAIIEVLSASIAAGGTTFSNFLNVKGVNGNYGG
EAWVYNRAGDPCKVCGSMIQRTKLSGRSSHFCPQCQS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgccggaagttgaaacagtccgcaggggtttaaatcaattaaccctccat
caaccgattactggtggagatgttttgcttgcaagcactgtcgcttatccttttgctgct
gaccagtttattggagatcttaaaggtaacaccattgaatcctggatccgttgcgggaaa
tatctgctggctgagctttcttcttctgcttggttgggtgtacatttgcgcatgactgga
caattgttatggttaagtcaagaggaatcattacataaacacaccagggtaagattgttt
tttggcaaggagcaagaactacggtttgtagaccaacgtacctttggtaaaatgtggtat
gtgccaagtggggtagtgagggaggaaatcataacaggtttaggcaaactagcaattgac
ccctttgctgtagagttcacacctgaatacttggcaactaaactggcaaaggtccgtcgt
cccattaaaaccgccctattggatcagtctatagtagcaggtttaggaaatatttatgct
gatgaagctttatttaaaagtggtattttaccaactactatctccacaaacatagacaaa
aaacagataaggagtttaagaatggccataattgaggttctatcagctagtatagctgct
ggtggtaccacttttagtaactttttgaatgtcaaaggtgtaaatggcaattatggtggt
gaagcttgggtatacaaccgagcgggagatccctgcaaggtttgtggtagcatgatccaa
aggactaaactgagtgggcgttctagtcacttttgtcctcagtgtcaaagttag
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