Raphidiopsis curvata: NIES932_29260
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Entry
NIES932_29260 CDS
T09812
Name
(GenBank) tRNA-i(6)A37 modification enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rcs
Raphidiopsis curvata
Brite
KEGG Orthology (KO) [BR:
rcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcs03016
]
NIES932_29260
Enzymes [BR:
rcs01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
NIES932_29260
Transfer RNA biogenesis [BR:
rcs03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
NIES932_29260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
BAZ91418
LinkDB
All DBs
Position
3183938..3185281
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AA seq
447 aa
AA seq
DB search
MNGLPRRYHITTFGCQMNKADSERMAGILEDMGFEWSENPQNANLIVYNTCTIRDNAEQK
VYSYLGRQAKRKHQEPDLTLVVAGCVAQQEGQALLRRVPELDLVMGPQYANRLKDLLNSV
FAGNQVVATEEVNILEDITQPRRDSQVTAWVNVIYGCNERCTYCVVPNVRGVEQSRTPEA
IRGEMEILGQQGYREITLLGQNIDAYGRDLPGSTAEGRNLHTFTNLLYYVHDVPGIERIR
FATSHPRYFTERLIKACAELPKICEHFHIPFQSGDNEILKAMSRGYTQEKYRRIINTIRS
YMPDASISADAIVGFPGETEIQFENTLQLVDDIGFDHLNTAAYSPRPGTPAALWDNQLSE
EIKSDRLQRLNHLVNVKAAQRSQRYLGRMEEVLVEDQNPKDQSQVMGRTRGNRLAFFQGD
INQLRGKMVRVKIQEVRAFSLSGDLVE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtttacctcgtcgttatcacattaccacattcggttgccaaatgaataaagct
gactcagagcgcatggctggtatactggaagatatgggctttgaatggtcagaaaatcct
cagaatgctaatctgattgtctacaatacttgcactattcgggacaatgcagaacaaaag
gtttactcttatttgggtagacaggctaaacgtaaacatcaagaaccggatttgactctg
gttgttgctggctgtgtggcacaacaagagggtcaggctttgttgcgacgagtgccagaa
ttagatttggttatgggtcctcaatatgctaaccgcttgaaggatttattgaattcggtt
tttgcgggaaatcaagtggtagctacggaagaggtaaacattttagaggatattacccag
ccccgtcgtgatagtcaggtaactgcttgggtgaacgtaatttacggttgtaatgaacgt
tgtacctattgtgtagtccctaatgtccggggtgtggagcagtctcgtacccctgaagct
attcgtggagaaatggaaattctgggtcaacagggttatcgggaaatcactcttttgggt
caaaatattgatgcttatggcagagatctacccggttcaaccgctgaaggtcgcaatttg
cacacttttaccaatttactctattatgtccacgatgtgccgggtattgaaaggattaga
tttgccactagtcaccctcggtattttacagaaaggttgattaaagcgtgtgcagagcta
cctaaaatttgtgaacactttcatattcccttccaatccggggataatgaaatattgaag
gccatgtcccgaggttatacccaagagaaatatcggcggatcattaacacaattcgtagc
tatatgccagatgcttctatcagtgcagatgctattgtgggatttcccggagaaacagaa
atacagtttgaaaatactctacaattggttgatgacattggatttgaccatttaaatact
gctgcttactcaccccgtcccggtactccagcagcactgtgggataatcaattgagtgaa
gaaatcaagagcgatcgcctgcaaagattgaatcacttagttaatgtgaaagcagcacag
cgatcgcagcgttacctagggagaatggaggaagtattggtagaagatcaaaatcccaag
gatcaatcccaggtcatgggtagaaccaggggaaaccgtctggccttctttcagggggat
atcaatcaactgagaggaaaaatggtcagggtaaaaattcaggaggttcgcgcttttagt
ttaagtggtgacctggtggagtaa
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