KEGG   Rhizobium croatiense: PYR68_01110
Entry
PYR68_01110       CDS       T09286                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rct  Rhizobium croatiense
Brite
KEGG Orthology (KO) [BR:rct00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rct03400]
    PYR68_01110
Enzymes [BR:rct01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PYR68_01110
    5.6.2.6  RNA 3'-5' helicase
     PYR68_01110
DNA repair and recombination proteins [BR:rct03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PYR68_01110
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII PSD4
Other DBs
NCBI-ProteinID: WET74160
LinkDB
Position
207544..210054
AA seq 836 aa
MDQIDSEARALLPAAFTRWFAEKGWRPRAHQLELLARAEAGESTLLIAPTGAGKTLAGFL
PSLTDLTRRGRIPPGSAFTGIHTLYVSPLKALAIDIERNLMKPVAEMGLPVTVENRTGDT
PNAKRQRQKLNPPDILLTTPEQVALLLANREAERFFKDLKYVVLDELHSLVTSKRGHMLS
LGLARLRRLAPGLKTIGLSATVAEPMDLQKWLVAQEEGREHHAGLVVVEGGAKPDISILS
TEERIPWAGHSAKYAIHDVYRQLLDHQTTLLFVNTRSQAEMLFQELWTINDDNLPIALHH
GSLDVAQRRKVEAAMAENRLRAVVATSTLDLGIDWGDVDLVIHVGAPKGASRLAQRIGRA
NHRMDEPSKAILVPANRFEVMECQAALDANYLGAQDTPPVGRGALDVLAQHVLGMACAEP
FDMLELYDEITSASPYADLTWENFERVVDFVATGGYALRTYERYARIRKTKEGRWRVSNP
AVAQQYRLNLGTIVESPMLNIRMVKRGEGGRIGRGGATLGKVEEYFLEQLSPGDTFIFSG
KVLRFEGIRENECLASQAFSLDAKIPSYAGGKFPLSTYLAEQVRAMIADPDHWRQLPDQV
RDWLSLQTDKSMLPKRDEFLIETFPRGSRFYMVAYPFEGRLAHQTLGMLLTRRLDRAGAK
PLGFVATDYSLAIWGLEDMGLMIGNGRLNLSDLYDADMLGDDLEAWLNESFLLKRTFRNC
AVIAGLIERRHPGKEKSGRQITVSADLIYDVLRSHEPDHILLQATRQDAATGLLDISRLG
DMLMRIRGHITHRPLDHISPLAVPVMLEIGREAVPGEAHDALLAEAADDLIAEAMA
NT seq 2511 nt   +upstreamnt  +downstreamnt
gtggaccagatcgattccgaagcccgcgccctgcttcctgccgcctttacccgctggttt
gcggaaaagggctggcgtccgcgcgcccatcagctggaattgcttgcccgcgctgaggcc
ggcgaaagcacgctgctgatcgcccccaccggcgccggcaagacgctcgctggttttctg
ccgtcgctcaccgatctcacccgccgcggccgcattccgccgggctccgcctttaccggc
atccatacgctctatgtctcgccgctgaaggcgctggcgatcgacatcgagcgcaatctg
atgaagccggtcgcggaaatgggcctgccggtcaccgtcgaaaaccgcaccggcgatacg
ccgaacgccaagcgccagcgccagaagctcaatccgccggatattctgctgacgacgccc
gaacaggtcgcactgcttctcgccaaccgcgaagccgagcgtttcttcaaggacctgaaa
tatgtggtgctcgacgaattgcattcgctcgtcacctccaagcgcggccacatgctgtcg
ctcggccttgcccgcctgcgccgccttgcccccggcctgaagaccatcggcctgtcggcg
accgtcgccgaaccgatggatctgcagaaatggctggtcgctcaggaagagggcagggag
catcacgccggcctcgtggtcgtcgaaggcggcgccaagcctgacatttcgatcttgtcg
accgaggagcgcattccctgggccggccattccgccaaatatgccattcacgatgtctac
cggcagctcctcgaccatcagacgacgctgctgttcgtcaatacccgcagccaggccgaa
atgctgttccaggaactctggacgatcaatgacgacaacctgccgatcgccctccatcac
ggctcgctcgatgtcgcccagcgccgcaaggtcgaggcggcgatggccgaaaaccggctg
cgcgccgtcgtcgccacttcgacgctcgatctcggcatcgactggggcgatgtcgatctc
gtcatccatgtcggcgcgccgaagggcgcctcgcgtcttgcccagcgcatcggccgcgcc
aatcaccgcatggacgagccctcgaaggcgatcctcgtgcccgccaaccgtttcgaggtc
atggaatgccaggcggcgctcgacgccaattatctcggcgcccaggacacgccgccggtc
ggccgcggcgcgctcgacgtgctcgcccagcacgtgctcggcatggcctgcgccgaaccc
ttcgacatgctggaactctatgacgagatcaccagcgcctcgccctatgccgatctcacc
tgggaaaacttcgaacgcgtcgtcgatttcgtcgcgaccggcggttatgcgctgaggacc
tacgagcgttacgcccgcatccgcaagaccaaggagggacgctggcgggtctccaatcct
gccgtcgcccagcaatatcgccttaacctcggcaccatcgtcgaaagcccgatgctgaac
atccgcatggtcaagcgcggcgagggcggccggatcggccgcggcggcgccacgctgggc
aaggtcgaagaatatttcctcgagcaattgtcgcccggagataccttcatcttctccggc
aaggtgctgcgcttcgaaggcatccgcgaaaacgaatgcctggcctcgcaggccttctcg
ctcgatgcgaagatcccctcctatgccggcggcaaattcccgctgtcgacctatctcgcc
gaacaggtgcgggcgatgatcgccgaccccgaccactggcgccagctgccggatcaggtg
cgcgactggctgtcgctgcagacggacaagtcgatgctgccgaagcgcgacgagttcctg
atcgaaaccttcccgcgcggcagccgcttctatatggtcgcctatcccttcgaaggccgc
cttgcccatcagacgctcggaatgctgctgacgcgccggctggaccgggccggcgccaag
ccgctcggcttcgtcgccaccgattattctctcgccatctggggcctggaggatatgggc
ctgatgatcggcaacggccggctcaacctttccgacctctacgacgcggatatgctgggc
gacgatctcgaggcctggctcaacgaatccttcctgttgaagcgcaccttccgcaattgc
gccgtgattgcaggcttgatcgagcgccgccatcccggcaaggaaaagagcggccgccag
atcaccgtctccgccgatctgatctatgacgtgctgcgcagccacgagccggatcatatc
ctcttgcaggcgacgcggcaggatgcggcgaccggacttttggatataagccgacttggc
gatatgctgatgcgaatcaggggccatatcacccatcgcccgctcgaccatatttccccg
ctcgccgtgccggtgatgctggagatcggacgcgaagcggtgccgggcgaggcccatgac
gcattgctcgccgaagcggcggacgatctgatcgccgaagcgatggcctga

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