Rhizobium croatiense: PYR68_01230
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Entry
PYR68_01230 CDS
T09286
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rct
Rhizobium croatiense
Pathway
rct03420
Nucleotide excision repair
rct03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PYR68_01230
03430 Mismatch repair
PYR68_01230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rct03400
]
PYR68_01230
Enzymes [BR:
rct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PYR68_01230
DNA repair and recombination proteins [BR:
rct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PYR68_01230
MMR (mismatch excision repair)
Other MMR factors
PYR68_01230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
WET74183
LinkDB
All DBs
Position
complement(239216..241276)
Genome browser
AA seq
686 aa
AA seq
DB search
MYLEKLNPQQRMAVEHGTLTDGSHIAGPLLVIAGAGSGKTNTLAHRVAHLIVKGADPRRI
LLMTFSRRAAAEMARRVERICRDVLGSNAGVMADALHWSGTFHGIGARLLRDYAQQIGLD
ADFTIHDREDSADLMNLIRHDLGFSKTESRFPAKGTCLAIYSRAVNSETALDQVLRDAFP
WCAAWEKQLRELFACYVEAKQSQNVLDYDDLLLYWAQMVGESMIAEDIGSRFDHVLVDEY
QDTNRLQASILMALKPQGQGLTVVGDDAQSIYSFRAATVRNILDFPAAFSPPANIVTLDR
NYRSTQPILTAANAVIDLASERFTKNLWTERQSAERPRLVTVRDEAEQARYVADKVLDNR
EEGLKLKQQAVLFRASHHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAALRFAQNP
RDRVAGFRLMQILPGVGPSTAQKALDLMAEDASPLSALAAMPAPARCGEDWAAFVSMLQQ
MKSGKAGWPAEIELARQWYAPHLERLHEDAATRQADLLQLEQIAGGYASRERFLTELTLD
PPDATSDQAGVPLLDEDYLILSTIHSAKGQEWTKVFMLNVVDGCIPSDLAVGATAEIEEE
RRLLYVAMTRARDGLDLVVPQRFFTYGQNAQGDRHVYASRSRFIPATLLQFFEACSWPQV
KSDAAAQAQARQVRIDVGARMRGMWR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcgaaaagctcaatccccagcagcgcatggccgtcgagcacggcacgctcacc
gacggcagccatattgccgggccgctgctggtcatcgccggcgccggttccggcaagacg
aataccttggcgcatcgggtcgcccatctgatcgtcaagggcgccgatccccgccgcatc
ctgctgatgaccttctcgcgccgggcggccgccgaaatggcgcggcgcgtcgagcgcatc
tgccgcgatgtgctcggttcgaatgccggcgtcatggccgatgcgcttcattggtccggc
accttccacggcatcggcgcccggctgctgcgcgactatgcccagcagatcggcctcgat
gccgatttcaccatccatgaccgcgaagacagcgccgacctgatgaacctgatccggcac
gatctcggcttctccaagacggaaagccggtttccggccaagggcacctgccttgccatt
tactccagggcggtgaattcagagaccgcactcgaccaggtgctgcgcgacgcctttccc
tggtgcgcggcgtgggaaaagcagctgcgcgagcttttcgcctgctatgtcgaggccaag
cagagccagaacgtgctcgattacgacgacctcctgctctactgggcgcagatggtcggc
gagagcatgatcgccgaggatatcggcagtcgcttcgaccatgtgctggtcgacgaatat
caggacaccaaccggctgcaggcctcgatcctgatggcgctgaagccccaaggccagggg
ctgaccgtcgtcggcgacgatgcgcagtcgatctattccttccgcgcagcgacggtgcgc
aacatcctcgattttcccgcagccttcagcccgcccgccaatatcgtcacgctcgaccgc
aactatcgctcgacgcagccgatcctgacagccgccaacgccgtcatcgatctcgcctcg
gagcgcttcaccaagaatctctggaccgagcggcaatcggccgagcggccgcgcctcgtg
acggtgcgcgacgaggccgagcaagcgcgttacgttgccgacaaggtgctcgacaatcgc
gaggagggcctcaagctcaagcagcaggcggtgctgttccgcgcctcgcatcacagcggg
ccgctggaggtcgagctgacccggcgcaacattcccttcgtcaaattcggcgggctgaaa
tttctcgacagcgcccatgtcaaggatatgctggccgcccttcgcttcgcgcagaatccg
cgcgaccgggtggcgggcttccggctgatgcagatcctgccgggcgtcgggccgtcgacg
gcgcagaaggcactcgacctgatggccgaggatgcgagcccgctctcggcgctcgccgcc
atgccggcgccggcgcgctgcggcgaggactgggcggctttcgtttcgatgctgcagcag
atgaaatccggcaaggccggctggccggcggaaatcgagctggcgcggcaatggtacgcg
ccgcatttggaacggctgcatgaggacgcggcaacgcggcaggccgatctcctgcagctc
gagcagattgccggtggttatgcctcgcgcgagcgtttcctcaccgaactcacgctcgat
ccgccggatgcgaccagcgaccaggccggcgtgccgctgctcgacgaggactatctcatt
ctgtcgaccatccattcggccaagggccaggaatggacgaaagtcttcatgctgaatgtc
gtcgacggctgcattccgagcgatcttgccgtcggcgccaccgccgaaatcgaggaggag
cgccggctgctctatgtggcgatgacgcgcgcccgcgatggcctcgacctcgtcgtgccg
cagcgtttcttcacctatggacagaacgcccaaggcgaccggcacgtctatgcctcgcgc
agccgcttcattccggcgaccctgctgcaattcttcgaggcctgcagctggccgcaggtg
aaatcggatgccgccgcccaggcgcaggcgcggcaggtgcgcatcgatgtcggcgcccgc
atgcgcggcatgtggcgatag
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