Rhizobium croatiense: PYR68_03460
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Entry
PYR68_03460 CDS
T09286
Name
(GenBank) cadherin-like domain-containing protein
Organism
rct
Rhizobium croatiense
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_5
Big_9
Cadherin_4
CshA_repeat
HemolysinCabind
Peptidase_M10_C
Motif
Other DBs
NCBI-ProteinID:
WET74592
LinkDB
All DBs
Position
complement(703388..708025)
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AA seq
1545 aa
AA seq
DB search
MATTTVSGTTVTFSNSGAAANLTQSGTEDGSLQFTFDVLGASGGGVKTTIYSADDGVKND
DGGAAIIVTNKAFVDYNKDLLIQDGVGISFSQTSQMGATFWIGSDNKIHYDAAGISAQIN
ALDAGEMFKDTIQYTIKMSNGTLSVGTLTVVINGINDAPVLSGNAATLSAGGEDTPYTIS
TADLLAGFTDAEGDQMSVSGLTANHGTLVDNNDGTWTFTPDANYNGPVSLSYSVTDGNGG
SVPATQSFTLAAVNDAPVLSGNAATLSAGTEDTPYTVSTADLLVGFTDVDGDHLSVSGLT
ADHGALVDNNDGTWTFSPAGNYNGPVNLSYTVTDGNGGSVPASQSFTLAAVNDAPVLSGN
AATLAAGSEDTPYTFSTADLLAGFSDVDGDQLSVAGLTADHGALIDNNDGSWTFTPDANY
NGPVSLSYTVTDGNGGSVPATQSFTLAAVNDAPVLSGNAATLAAGSEDTPYTFSTADLLA
GFTDVDGDQLSVSGLTADHGALIDNNDGSWTFTPDANYNGPVNLSYSVTDGNGGSVPASQ
SFTLAAVNDAPVLSGNAATLSAGSEDTPYTFSTADLLAGFTDVDGDQLSVAGLTANHGAL
VDNNDGTWTFTPDANYNGPVNLSYTVTDGNGGSVPATQSFTLAAVNDAPVLSGNPATLSA
GSEDTPYTVSTADLLAGFTDVDGDQLSVSGLTADHGALVDNNDGSWTFTPDANYNGPVSL
SYTVTDGNGGSVPASQSFTLDAVNDAPVLSGNAATLSAGTEDTPYTFSTADLLAGFSDVD
GDQLSVSGLTADHGALVDNNDGSWTFTPEANYNGPVSLSYTVTDGNGGSVPATQSFTLAA
VNDAPVLSGNAATLSAGSEDTPYTFSTADLLAGFSDVDGDQLSVAGLTADHGALIDNNDG
SWTFTPDANYNGPVSLSYTVTDGNGGSVPATQSFTLAAVNDAPVLSGNAATLSAGSEDTP
YTVSTADLLVGFTDVDGDQLSVSGLTADHGALVDNNDGSWTFSPAGNYNGPVNLSYTVTD
GNGGSVPASQSFTLAAVNDAPVLSGNAATLSAGSEDTPYTFSTADLLAGFSDVDGDQLSV
AGLTADHGALVDNNDGSWTFTPDANYNGPVSLSYTVTDGNGGSVPATQSFTLAAVNDAPV
LSGNAATLAAGSEDTPYTFSTADLLVGFSDVDGDQLSVSGLTADHGALIDNNDGSWTFTP
DANYNGPVNLSYSVTDGNGGSVPASQSFTLAAVNDAPSAVVLSNTVTSTPENGGVIKVAD
IAVTDVDSGNNVLSLSGSDVASFTILNGALYFNGGADFEAKAGYDVTVVVNDATVGGTPD
ASHNFHLGITDVIESDSDTSNDHDTDTATATTTNWGETNGVDTKVGNAADNTISGGNSGD
ILYGQAGNDTLNGNNGADKLYGQAGNDILIGSQGLDTLYGGSGNDSLNGSGEQDDLWGGS
GNDTFVFTSAGDSASGAPDTIRDFHHGFDKIDVSGLDAYTLNPNTPGDQAFAWSGTMATT
HSAWYTESGGNTILHFDTNGDANTDETTIVLTGTNLGLTDSDFLL
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggcgactacgacagtatcaggcacgaccgtcacgttttcgaattcaggtgcggcagcc
aatctgacacaatccggcaccgaggacggcagccttcagttcacgttcgacgtcctgggc
gcaagcggcggcggagtgaagacgacgatctattcggcggatgacggcgtcaaaaacgac
gacggaggggcagccatcatcgtcaccaacaaggcgtttgtcgattacaacaaggacctg
ctgatccaggacggcgtgggcattagcttcagccaaaccagccagatgggagcaacattc
tggatcggcagcgacaacaagatccactatgacgcagccggtataagcgcgcagatcaac
gcgctcgatgccggagaaatgttcaaggacacgatccagtacacgatcaagatgtcgaac
ggcacgctcagcgtcggcacgctgacggttgtgatcaacggcatcaacgacgcacccgtc
ctcagcggcaatgctgcgacgctttcggcaggcggcgaggacacgccctacacgatcagc
accgctgacctgcttgccggcttcaccgatgccgagggcgatcagatgtcggtctccggc
ctcaccgccaatcatggcacgctggtcgacaacaatgacggcacctggaccttcacgcct
gatgccaactacaacggcccggtcagcctcagctactccgtcaccgacggcaacggcggc
agcgttccggcgacgcagagcttcacgctggcggcggtcaacgacgcgcccgtcctcagc
ggcaacgcggcgacgctttcggcaggcaccgaggacacgccctacacggtcagcaccgct
gacctgcttgtcggcttcaccgatgtcgacggcgatcacttgtcggtctccggccttacc
gccgatcatggcgcgctggtcgacaacaatgacggcacctggaccttctcgccggccgga
aactacaacggcccggtcaacctcagctacaccgttaccgacggcaatggcggcagtgtg
ccggcaagccagagcttcacgctggcggcggtcaacgatgcgccggttctcagcggcaat
gcggcgacgctggcggcaggtagcgaggacacgccctacacgttcagcaccgctgacctg
cttgccggcttctccgatgtcgacggcgaccagttgtcggtcgccggcctcaccgccgat
catggcgccctcatcgacaacaatgacggcagctggaccttcacgcctgatgccaactac
aacggcccggtcagcctcagctacaccgtcaccgacggcaatggcggcagcgttccggcg
acgcagagcttcacgctggcggcagtcaatgatgcacccgtcctcagcggcaatgcggcg
acgctggcggcaggcagcgaggacacgccctacacgttcagcaccgctgacctgctggcc
ggcttcaccgatgtcgacggcgatcagctgtcggtctccggcctcaccgccgatcatggc
gccctcatcgacaacaatgacggcagctggaccttcacgcctgatgccaactacaacggc
ccggtcaacctcagctactccgtcaccgacggcaacggcggcagtgtgccggcaagtcag
agcttcacgctggcggcggtcaacgacgcaccggtcctcagcggcaatgcggcgacgctt
tcggcaggcagcgaggacacgccctacacgttcagcactgccgacctgctggccggcttc
accgatgtcgacggcgaccagctgtcggtcgccggccttaccgccaatcatggcgccctg
gtcgacaacaacgacggcacctggaccttcacgcctgatgccaactacaacggcccggtc
aacctcagctacaccgtcaccgacggcaatggcggcagcgttccggcgacgcagagcttc
acgctggcggcagtcaatgatgcacccgtcctcagcggcaacccggcgacgctttcggca
ggcagcgaggacacgccctacacggtcagcaccgctgacctgctggccggcttcaccgat
gtcgacggcgatcagctgtcggtctccggcctcaccgccgaccatggcgcgctggtcgac
aacaatgacggcagctggaccttcacgcctgatgccaactacaacggcccggtcagcctc
agctacaccgtcaccgacggcaatggcggcagtgtcccggcaagccagagcttcacgctt
gatgcggtcaacgacgcaccggtcctcagcggcaatgcggcgacgctttcggctggcacc
gaggacacgccctacacgttcagcactgccgacctgcttgccggcttctccgatgtcgac
ggcgaccagctgtcggtctccggcctcaccgccgaccatggcgcgctggtcgacaacaat
gacggcagctggaccttcacgcctgaggccaactacaacggcccggtcagcctcagctac
accgtcaccgacggcaatggcggcagtgtgccggcgacccagagcttcacactggcggcg
gtcaatgatgcacccgtcctcagcggcaacgcggcgaccctttcggcaggcagcgaggac
acgccctacacgttcagcaccgctgacctgctggccggcttctccgatgtcgacggcgat
cagttgtcggtcgccggcctcaccgccgatcatggcgccctgatcgacaacaatgacggc
agctggaccttcacgcctgatgccaactacaacggcccggtcagcctcagctacaccgtc
accgacggcaatggcggcagcgttccggcgacgcagagcttcacgctggcggcagtcaat
gatgcacccgtcctcagcggcaatgcggcgacgctttcggcaggcagcgaggacacgccc
tacacggtcagcaccgctgacctgcttgtcggcttcaccgatgtcgacggcgatcagttg
tcggtctccggccttaccgccgatcatggcgcgctggtcgacaacaatgacggcagctgg
accttctcgccggccggaaactacaacggcccggtcaacctcagctacaccgttaccgac
ggcaatggcggcagtgtcccggcaagccagagcttcacgctggcggcggtcaacgacgca
cccgtcctcagcggcaatgcggcgacgctttcggcaggcagcgaggacacgccctacacg
ttcagcaccgctgacctgctggccggcttctccgatgtcgacggcgaccagttgtcggtc
gccggcctcaccgccgatcatggcgccctggtcgacaacaatgacggcagctggaccttc
acgcctgatgccaactacaacggcccggtcagcctcagctacaccgtcaccgacggcaat
ggcggcagcgttccggcgacgcagagcttcacgctggcggcagtcaatgatgcacccgtc
ctcagcggcaatgcggcgacgctggcggcaggcagcgaggacacgccctacacgttcagc
accgctgacctgcttgtcggcttctccgatgtcgacggcgatcagctgtcggtctccggc
ctcaccgccgatcatggcgccctgatcgacaacaatgacggcagctggaccttcacgcct
gatgccaactacaacggcccggtcaacctcagctactccgtcaccgacggcaacggcggc
agtgtgccggcaagtcagagcttcacgctggcggcggtcaacgacgcaccgtcggcggtt
gtgttgtcgaacacagtcacgtcgacacccgaaaatgggggcgtgatcaaagttgccgat
atcgcggtgacggatgtcgattccggaaacaatgtgttgtcgctgtctggaagtgacgtc
gcctcattcacgatcttgaatggcgcgctgtacttcaacggtggcgcggacttcgaagcg
aaggccggctacgacgtgaccgttgttgtgaatgatgcaacggttggcggcacgccggac
gcctcgcataacttccatctcggcatcaccgacgtgatcgaaagcgacagcgatacgagc
aatgaccacgatacggacacagcgaccgccacaacgacaaattggggcgaaaccaacggt
gtcgataccaaggtcggaaatgcggccgacaataccatcagcggcggcaactccggtgat
atcctctatggccaggcaggtaacgacacgctgaatggaaataacggggccgataagctc
tacggccaggcaggtaacgacatactgatcggaagccaaggcctggacacgttgtacggg
ggctccggcaacgactcgctcaatggcagcggcgagcaggatgacctttggggtggctcc
ggcaatgacacatttgtgtttacctcagccggcgacagcgcgtccggcgccccggacacg
atccgtgacttccaccatgggtttgacaagatcgatgtgagcgggctcgacgcgtatacg
ctcaaccccaacaccccaggcgatcaagccttcgcctggagtggaacgatggccacgacc
cacagtgcctggtacacggaaagcggcggcaacacgatccttcacttcgataccaacggg
gacgcgaataccgacgaaacgacgatcgtcttaacaggcacaaacctgggcttgacggat
tcggatttcctcctctga
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