Rhizobium croatiense: PYR68_05845
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Entry
PYR68_05845 CDS
T09286
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rct
Rhizobium croatiense
Brite
KEGG Orthology (KO) [BR:
rct00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rct01002
]
PYR68_05845
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rct01011
]
PYR68_05845
Peptidases and inhibitors [BR:
rct01002
]
Cysteine peptidases
Family C82
PYR68_05845
Peptidoglycan biosynthesis and degradation proteins [BR:
rct01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PYR68_05845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WET75035
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All DBs
Position
1177310..1178614
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AA seq
434 aa
AA seq
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MSKKNGIEALSRRAFLASAATVGAGALAAGPAFAQSALDGLLNAPRRGNWDDQFDAKAAS
RTATAVVSNTPILGPQSVASAQQAIMQYQQIAAAGGWPEVNPGDQRLQLGVSHPAVQALR
QRLAITGDLPREAGLSSAFDSYVDGAVKRFQARHGLPADGVLGEFTLKAMNIPADVRLQQ
LNTNLIRLQTFPEDLGRRHLMVNIPAAYVEAVEDGSVATRHTAVVGRLSRPTHLVNSKIY
EVILNPYWTAPRSIVEKDIMPLMRKDPTYLEKNAIRLLDGKGNEVAPETVDWNGEAPNLM
FRQDPGKTNAMASTKINFYNKNGEYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLTNWLL
RETPGWSRQQMEQVIASGVNTPIKLAAEVPVYFVYISAWGMPDGIVQFRDDIYQMDGNAE
LALDTTAGMEQPVQ
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaaaaacggaattgaagctctctcgcgccgcgctttcctggcgtcggcggca
acggttggcgccggcgcgcttgctgccgggcctgcatttgcgcaatcggcgctcgatggg
ctcctgaacgcgccgcggcgcggcaactgggacgaccagtttgacgccaaggcggcttcg
cggacggcgaccgccgtcgtgtccaatacgccgatcctcgggcctcaatcggtcgccagc
gcccagcaggcgataatgcagtatcagcagatcgcggccgccggcggctggcctgaagtc
aatcccggcgatcagcgcctgcagctcggtgtgagccatcccgccgtccaggcgctgcgc
cagcgtctggcgatcaccggcgacctgccgcgtgaggccggcctgtcgagcgccttcgat
tcctatgtcgacggcgccgtcaagcgcttccaggcgcgtcacggtctgccggccgacggc
gtactcggcgaattcacgctcaaggcgatgaacatccccgccgatgtccgtctgcagcag
ctgaacaccaacctcatccgtctgcaaaccttccccgaagacctgggacgccgtcacctg
atggtcaatattccggccgcctatgtcgaggctgtcgaagacggcagtgtcgcgacgcgt
cataccgcggttgtcggccgcttgagccgcccgacgcatctcgtcaattcgaagatctac
gaggtcattctcaatccttactggacggcgccgcgctcgatcgtcgagaaggacatcatg
ccgctgatgcgcaaggatccgacctatctcgaaaagaacgccatccgtctgctcgacggc
aagggcaacgaagtcgcccccgagaccgtcgactggaacggcgaggcaccgaacctgatg
ttccgtcaggaccccggcaagaccaacgccatggcgtcgacgaagatcaacttctacaac
aagaacggcgagtacatgcacgacacgccgcagcagggcctgttcaacaagctgatgcgc
ttcgaatcctcgggctgcgtccgcgtccagaacgtgcgcgacctgacgaactggctgctg
cgcgagacccccggctggagccgccagcagatggagcaggtaatcgcaagcggcgtcaac
acgccgatcaagctcgcggcggaagttccggtctatttcgtctacatctccgcctggggc
atgcccgacggcatcgtccagttccgcgacgacatctatcagatggacggcaatgccgaa
ttggcgctcgataccacggctggcatggaacagccggtgcaataa
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