Rhizobium croatiense: PYR68_05885
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Entry
PYR68_05885 CDS
T09286
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rct
Rhizobium croatiense
Pathway
rct00521
Streptomycin biosynthesis
rct00523
Polyketide sugar unit biosynthesis
rct00541
Biosynthesis of various nucleotide sugars
rct01100
Metabolic pathways
rct01110
Biosynthesis of secondary metabolites
rct01250
Biosynthesis of nucleotide sugars
Module
rct_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rct00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PYR68_05885 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PYR68_05885 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PYR68_05885 (rfbC)
Enzymes [BR:
rct01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PYR68_05885 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WET75043
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All DBs
Position
complement(1185424..1186002)
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AA seq
192 aa
AA seq
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MHIETAAIEGIVAITPPRFGDHRGYFSEVFKDAWFRENVADVTFVQDNESLSAQAGTVRG
LHFQIPPFAQGKLVRCLAGRIMDVVVDIRVGSPSFGKWLSQELSPDTGKQLWIPPGFAHG
FATIEPNSVISYKVTAPYSPQHDRGIAWNDPAIGIRWPFDERDIVSSDKDKTLPRLADLP
SHFSYSAQQPQD
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcacattgagaccgccgccatcgagggcatcgttgcaatcacgccgccacgttttggc
gatcaccgcggctacttctccgaagtattcaaggatgcgtggttccgggaaaatgtggcc
gacgtcacgttcgtccaggacaatgaatcgctttcggcgcaggccggaaccgtccggggg
ctgcatttccagataccgcccttcgcacagggcaagcttgtgcgctgccttgccggccgg
atcatggatgtcgtcgtcgacatccgcgtgggatcaccgagcttcggcaaatggctctct
caggagctctcgccggacaccggcaaacagctctggataccgcccggcttcgcacacgga
ttcgcaacgatcgagccgaacagcgtcatcagctacaaggtaaccgcaccctatagcccg
cagcatgatcggggcatcgcgtggaacgatccggcgatcggcattcgctggcccttcgat
gagagagacatcgtatcgtccgacaaggacaagacgctgccgcggctcgccgatctgcca
agccatttttcctattcagcacagcaaccccaggattga
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