Rhizobium croatiense: PYR68_07770
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Entry
PYR68_07770 CDS
T09286
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rct
Rhizobium croatiense
Pathway
rct03410
Base excision repair
rct03430
Mismatch repair
rct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PYR68_07770 (recJ)
03430 Mismatch repair
PYR68_07770 (recJ)
03440 Homologous recombination
PYR68_07770 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rct03400
]
PYR68_07770 (recJ)
DNA repair and recombination proteins [BR:
rct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PYR68_07770 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PYR68_07770 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PYR68_07770 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF2975
Motif
Other DBs
NCBI-ProteinID:
WET75382
LinkDB
All DBs
Position
1547056..1548858
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AA seq
600 aa
AA seq
DB search
MADLVDPVQRAFLGVEKSALDNRWVARLDQAGQNRALAMSQVHGLPDLIARVLAGRGVPV
DEAIEFLDPTIRSLMPDPHTLTDCEKAATRLMRAIESGESVAIFGDYDVDGAASSALMFR
FLSHFGVKANIYIPDRIFEGYGPNPAAINQLIDNGARLIVTVDCGSTSHEALAVAAARNI
DVVVIDHHQVTHELPPCHALVNPNREDDLSGQGHLCAAGVVFMVLVATLRLLRAAGNKRI
LTIDLLQWLDIVALATVCDVVPLKGLNRAYVVKGLVAARHQSNAGLAALFRKAGLAGPVT
PYHFGFLIGPRINAGGRIGDAALGSRLLTLDDAGEAEMIAQRLDELNRERQAMEAMMLQE
AEAEALAEYGDGEGASVIVTAHEKWHPGIVGLIAARLKEKFKRPAFAIAFDPSGRGTGSG
RSINGFDMGRMVRAAVDEGLLVKGGGHAMAAGLTVERADLGRLRTFFTEKAARTVANLVA
NETLKIDGAIGASGATLELIDRLEAAGPYGSGHAQPLFAVPAHRVRDARLVGEKHVKVTL
EAMDGSRLDGIAFRAADTALGNLLVNSRGASLHVAGTLGAEHYQGARRIQLRVCDAAPAI
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcagatctcgtcgatccggtacagcgcgcgtttctcggcgtggagaaatccgcgctc
gacaatcgctgggttgcacggctcgaccaggccggtcagaatcgggcgctcgccatgtcg
caggttcacgggctgccggatctgatcgctcgcgttctcgccgggcgcggcgtcccggtg
gacgaggcgatcgaatttctcgatccgacgatccgcagcctgatgcccgatccccataca
ctgaccgactgcgagaaggcggcgacccgcctcatgcgcgcgatcgagagcggcgagagc
gtggcgattttcggcgactacgacgtcgacggcgcggcttcatcggcgctgatgttccgc
tttctcagccatttcggcgtcaaggcgaacatctacattcccgatcggatctttgaaggt
tacggccccaatccggcggcgatcaaccagttgatcgacaatggcgcccggctgatcgtc
accgtcgattgcggctccaccagtcacgaggcgcttgcggttgctgccgcgcgcaatatc
gatgtcgtggttatcgatcaccaccaggtgacacacgagctgccgccttgccatgcactg
gtcaacccgaaccgcgaagacgatctctcggggcaggggcacctgtgcgcggccggcgtc
gtcttcatggtgctggtggcgacgctgaggctgctgcgcgcggccggcaacaagcgcatc
ctgaccatcgacctgttgcaatggctggatatcgtcgcgcttgccaccgtctgtgatgtc
gtgccgctgaaggggctcaaccgcgcctatgtggtgaaggggctggtcgccgcccgccac
cagagcaatgccggccttgccgcactcttccgcaaggccgggctcgccggcccggtgaca
ccctatcatttcggcttcctgatcggcccgcgcatcaatgccggcggacgaatcggcgat
gccgccctcggaagccgcctgttgacgctcgacgatgccggcgaagctgaaatgatcgcc
cagcgcctcgacgagctcaatcgcgagcgccaggcgatggaggccatgatgctgcaggag
gcggaagccgaggcgctcgccgaatatggcgacggcgagggcgcctccgtcatcgtcacc
gcccatgagaagtggcatcccggcatcgtcgggctgatcgcggcgcgactgaaggaaaag
ttcaaacggccggccttcgcgatcgccttcgatccctccggtcgcggcaccggctcgggc
cgctccatcaacggcttcgacatgggcagaatggtgcgggcggcggtcgacgaggggctg
ctcgtcaagggcggcggccatgcaatggccgcgggcctgaccgtcgagcgcgccgacctc
ggcaggctcagaaccttcttcaccgaaaaggcggcaaggacagtggcgaatctcgtcgcc
aacgagacgctgaagatcgacggagcgatcggcgccagcggcgccacgctcgaactgatc
gaccgcctggaggctgccggtccctatggctccggccacgcccagccgctctttgccgtg
ccggcgcaccgcgtgcgcgacgcccgcctggtcggcgagaaacatgtgaaggtgacgctg
gaggcaatggacgggtcgcggctcgatggaatcgccttccgcgccgccgatacggcgctc
ggcaatcttctcgtcaattcacgcggcgccagcctgcatgtggcgggtacgctcggcgcc
gagcattaccagggcgcccgccgcatccagctgcgcgtctgcgatgccgcgccggcaata
tag
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