KEGG   Rhizobium croatiense: PYR68_08305
Entry
PYR68_08305       CDS       T09286                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rct  Rhizobium croatiense
Pathway
rct00010  Glycolysis / Gluconeogenesis
rct00020  Citrate cycle (TCA cycle)
rct00260  Glycine, serine and threonine metabolism
rct00280  Valine, leucine and isoleucine degradation
rct00310  Lysine degradation
rct00380  Tryptophan metabolism
rct00620  Pyruvate metabolism
rct00630  Glyoxylate and dicarboxylate metabolism
rct00640  Propanoate metabolism
rct00670  One carbon pool by folate
rct00785  Lipoic acid metabolism
rct01100  Metabolic pathways
rct01110  Biosynthesis of secondary metabolites
rct01120  Microbial metabolism in diverse environments
rct01200  Carbon metabolism
rct01210  2-Oxocarboxylic acid metabolism
rct01240  Biosynthesis of cofactors
Module
rct_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rct_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rct_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rct_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rct00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PYR68_08305 (lpdA)
   00020 Citrate cycle (TCA cycle)
    PYR68_08305 (lpdA)
   00620 Pyruvate metabolism
    PYR68_08305 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    PYR68_08305 (lpdA)
   00640 Propanoate metabolism
    PYR68_08305 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PYR68_08305 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    PYR68_08305 (lpdA)
   00310 Lysine degradation
    PYR68_08305 (lpdA)
   00380 Tryptophan metabolism
    PYR68_08305 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PYR68_08305 (lpdA)
   00670 One carbon pool by folate
    PYR68_08305 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rct04147]
    PYR68_08305 (lpdA)
Enzymes [BR:rct01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PYR68_08305 (lpdA)
Exosome [BR:rct04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PYR68_08305 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored FAD_binding_3 HI0933_like NAD_binding_8 GIDA DAO Lys_Orn_oxgnase Thi4 2-Hacid_dh_C Amino_oxidase XdhC_C 3HCDH_N
Other DBs
NCBI-ProteinID: WET75476
LinkDB
Position
1639867..1641312
AA seq 481 aa
MAESYDVIIIGSGPGGYVAAIRASQLGLKTAIVEREHMGGICLNWGCIPTKALLRSAEVL
DHANHFKDFGLVLEGTVKPDAKAVVGRSRAVSARLNAGVGFLMKKNKIDIIWGEGKITKP
GEIVVGKSSKPVVEPQHPLPKNVKGEGTYTAKHIIIATGARPRALPGIEPDGKLIWTYFE
ALKPEALPKSLIVMGSGAIGIEFASFYRSMGVEVTVVEVMPTIMPVEDAEITAIARKQLE
KRGLKIFTSAKVTKVEKGAGSITAHVETSDGKVQQITADRMISAVGVQGNIENLGLEALG
IKTDRGCVVADGYGKTNVAGIYAIGDVAGPPMLAHKAEHEGVVCVEKIAGLPNVHPTDKG
KVPGCTYCNPQVASVGLTEAKAKELGRDIRVGRFSFAANGKAIALGEDQGMVKVIFDKKT
GELLGAHMVGAEVTELIQGFVVAMNLETTEEELMHTIFPHPTVSETMKEAVLDAYGRVLN
A
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggctgaatcctacgacgtcatcatcatcggctccggccccggcggctatgtcgccgcc
atccgcgccagccagctcggcctgaagaccgcgatcgtcgagcgcgagcatatgggcggc
atctgcctgaactggggctgcattccgaccaaggcgctgctgcgctcggccgaagtgctc
gaccacgccaaccacttcaaggatttcggtctcgttctcgaaggcaccgtcaagccggac
gccaaggccgtcgtcggccgctcgcgcgccgtttccgcccgactgaacgccggcgtcggc
ttcctgatgaagaagaacaagatcgacatcatctggggcgaaggaaagatcaccaaacca
ggcgagatcgtcgtcggaaagtcgtcgaagccggtcgtcgagccgcagcatccgctgccg
aagaacgtcaagggcgagggcacctataccgccaagcacatcatcatcgcgaccggcgcc
cgcccgcgcgcgctgccgggcatcgagccggatggtaagctgatctggacctatttcgag
gcgctgaagcccgaggcactgccgaagtcgctgatcgtcatgggttcgggcgcgatcggc
atcgaattcgccagcttctaccgctcgatgggcgtcgaggtgacggttgtcgaagtgatg
ccgacgatcatgccggtcgaggatgccgaaatcaccgccattgcccgcaagcagctggag
aagcgcggcctgaagatcttcaccagcgccaaggtcaccaaggtcgagaagggtgccggc
agcatcaccgcccatgtcgagacgtcagacggcaaggtgcagcagatcaccgccgaccgg
atgatttcggccgtcggcgttcagggcaatatcgaaaatctcggcctggaagcgctcggc
atcaagaccgaccgcggctgcgtcgtcgccgacggttacggcaagaccaatgtcgccggc
atctatgcgatcggcgacgtcgctgggccgccgatgctggcgcacaaggccgagcatgag
ggtgtggtctgcgtcgagaagatcgccggcctgccgaatgtccatccgaccgacaagggc
aaggttccgggctgcacctattgcaacccgcaggtcgcttccgtcggcctaaccgaagcc
aaggccaaggagctgggccgcgacatccgcgtcggccgtttctcttttgcggccaacggc
aaggcgattgcgctcggcgaagaccagggcatggtgaaggtgattttcgacaagaagacc
ggcgagttgctcggcgcccacatggtcggcgccgaagtgaccgaactcattcaaggcttc
gtcgtcgcgatgaacctcgagacgacagaggaagagctgatgcacacgatcttcccgcat
ccgaccgtctccgagacgatgaaggaagcggtgctggatgcctatggccgcgtgctgaac
gcttga

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