Rhizobium croatiense: PYR68_12535
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Entry
PYR68_12535 CDS
T09286
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rct
Rhizobium croatiense
Pathway
rct03420
Nucleotide excision repair
rct03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PYR68_12535
03430 Mismatch repair
PYR68_12535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rct03400
]
PYR68_12535
Enzymes [BR:
rct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PYR68_12535
DNA repair and recombination proteins [BR:
rct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PYR68_12535
MMR (mismatch excision repair)
Other MMR factors
PYR68_12535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WET72326
LinkDB
All DBs
Position
2492435..2494915
Genome browser
AA seq
826 aa
AA seq
DB search
MSNSFDDIPFFDEEPGEMARKPQPPAAPAGRAPAASGGIAARAMAARDGGKRPDYLAGLN
PEQTEAVETLEGPVLVLAGAGTGKTRVLTTRIAHILNTGRAFPSQILAVTFTNKAAREMK
ERIALLVGGAVEGMPWLGTFHSIGVKLLRRHAELVGLSSDFTILDTDDVVRLIKQLIQAE
GLDDKRWPAKQFAGMIDTWKNKGLGPADIPEGDARAFANGRGRDLYFAYQARLTTLNACD
FGDLLMHPIAIFRKNPDLLKEYHGRFRYILVDEYQDTNTAQYMWLRLLAQRAKGEPQNVC
CVGDDDQSIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGAAAHLIAHNEGRL
GKTLFTDRADPDDVKVQVHASWDSEEEARAIGEEIEQLQRGKHLLNDMAILVRASFQMRE
FEDRFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVAQPADDLAFERIINTPKRGLGDTT
VRALHDYARARDIPMLAAAADMIETDELKPKARKALFDVIQSFRRWQELLENKPHTELAE
QILEESGYTDMWKNDKSAEAPGRLENLKELIRSMESFESMRGFLEHVSLVMDAETNENLD
AVSIMTLHSAKGLEFDTVFLPGWEEGLFPHQRSLDESGRAGLEEERRLAYVGITRAKRRC
HIWFVSNRRIHGLWQSTLPSRFLDELPETHVEVAEMEQSYGGYGRGGYGQSRFDKSEPFA
NSYSTPGWKRAQANRTDATRDNWGTRSGHAVERIGYGESGPKGRTIDGELVAKSTSPEPS
RFTLGDRVFHMKFGNGNITGIEGNKLTIDFDRAGQKRVLDGFVERV
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatagtttcgacgatattcccttcttcgacgaagagccgggcgagatggcgcgc
aagccgcagccgcctgctgcacccgccggaagggcgcccgctgccagcggcgggatcgcc
gcccgcgccatggcggcgcgcgacggcggcaagcgaccggattacctcgcaggcctcaat
cccgaacagacggaagccgtggaaaccttggaaggtccagttctcgtccttgccggcgcc
ggcaccggcaaaacgcgggtactgaccacgcgcatcgcccacatcctcaataccggccgc
gccttcccctcgcagattctcgccgtcaccttcaccaacaaggccgcccgcgagatgaag
gagcgcatcgccctgctcgtcggcggcgccgtcgaaggcatgccctggctcggcaccttc
cattcgatcggcgtcaagcttctgcgccgccacgccgaactcgtcggcctcagctccgat
ttcaccattcttgacactgacgacgtcgtccgtctgatcaagcagctgatccaggccgaa
ggcctcgacgacaaacgctggccggccaagcagttcgccggcatgatcgacacctggaag
aacaaggggctcggcccggccgatatccccgagggcgacgcccgcgcctttgccaatggc
cgcggccgcgatctctatttcgcctatcaggcgcgcctgacgacactgaacgcctgcgac
ttcggcgatctgctgatgcatccgatcgcgatcttccgcaagaacccggatctgctcaag
gaatatcacggccgcttccgctatattcttgtcgacgagtaccaggacaccaataccgcg
caatatatgtggctgaggcttctcgcccagcgcgccaagggcgagccgcagaatgtctgc
tgcgtcggcgacgacgaccagtcgatctatggctggcgcggcgcggaggtcgacaatatc
ctgcgcttcgagaaggatttccccggcgccaaggtaatcaagctcgaacgcaattaccgc
tcgaccgaacatatcctcggtgccgccgcccatctgatcgcccataatgaaggccgcctg
ggcaagacgctgttcaccgaccgcgccgatcccgatgacgtcaaggtgcaggtccacgcc
tcctgggattcggaggaggaagcccgcgccatcggcgaagagatcgagcagctccagcgg
ggcaagcatctgctgaacgacatggcgatccttgtgcgcgcttccttccaaatgcgcgag
ttcgaagaccgcttcgtcacgctcggcctcaactaccgcgtcatcggcggcccgcgcttc
tatgaacgcctggaaatccgcgacgccatggcctatttccgcctggtcgcgcagccggcg
gacgacctcgccttcgagcgcatcatcaacacgccgaagcgcggcctcggcgacacgacg
gtgcgcgctctgcacgactatgcgcgtgcccgcgacatcccgatgctggcggcggcggcc
gacatgatcgagaccgacgagttgaagccgaaggcgcgcaaagccctcttcgacgtgatt
caatctttccgccgatggcaggaactgcttgaaaacaaaccgcataccgaacttgccgag
cagatcctcgaggagtccggctataccgacatgtggaagaacgacaagagcgccgaagcg
cccggccgccttgaaaacctgaaggaactgatccgctcgatggagagcttcgagtcgatg
cgcggtttcctcgagcacgtctccctcgtcatggacgcagaaaccaacgagaacctcgac
gccgtttcgataatgacgctgcattcggccaagggcctggaattcgataccgtcttcctg
cccggctgggaggaaggcctgttcccgcaccagcgctcgctggatgagagcggccgcgcc
ggcctggaggaagaacgacggctggcctatgtcggcattacccgcgccaagcgccgctgc
cacatctggttcgtctccaaccgccgcatccacggcctctggcaatcgacgctgccctcg
cgcttcctcgacgagctgccggaaacccatgtcgaggtcgccgagatggagcagagctac
ggcggttacggccgcggcggctacggccagtcccgcttcgacaaatcagaacctttcgcc
aactcctattccacgcccggctggaaacgcgcccaggccaacaggaccgacgccacgcgc
gacaactggggcacccgctccggccacgccgtcgaacgcatcggctatggcgaaagcggc
ccgaagggacgcaccatcgacggcgagctggtcgcaaagtcgacctcgccggagccgtcg
cgcttcaccctcggcgatcgcgtattccatatgaaattcggcaatggcaacattaccggc
atcgaaggcaacaagctgacgatcgacttcgaccgtgcggggcagaagcgggtgctggac
ggcttcgtcgagcgcgtctga
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