Rhizobium croatiense: PYR68_17870
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Entry
PYR68_17870 CDS
T09286
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rct
Rhizobium croatiense
Pathway
rct00300
Lysine biosynthesis
rct00470
D-Amino acid metabolism
rct01100
Metabolic pathways
rct01110
Biosynthesis of secondary metabolites
rct01120
Microbial metabolism in diverse environments
rct01230
Biosynthesis of amino acids
Module
rct_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rct00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PYR68_17870 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PYR68_17870 (lysA)
Enzymes [BR:
rct01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PYR68_17870 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WET73278
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All DBs
Position
3626383..3627651
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AA seq
422 aa
AA seq
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MNHFEHRDGILHAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMK
ANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIY
CFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARA
IYAHAAKLPGIEVTGIDMHIGSQITELQPFDDAFKLLRDLVATLRADGHTIDHVDIGGGL
GVPYKDDNNPPPLPDAYAAIVKNQLRDLDCKVITEPGRLIVGNAGILVTEVLYVKDGGEK
TFVIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAM
PKPGDLLAVSTAGAYGAVQAGTYNSRLLVPEVLVKGSDFHAIRPRRTYAELISLDSVPAW
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccacttcgagcaccgcgacggcatccttcacgccgagaacgttcccgttcccgag
atcgccaaggcggtcggcacgccgttctacgtctattccaccgccaccctggaacgccat
taccgggtcttctccgaagccttcgccgatatggactcgatggtctgttacgcgatgaag
gcgaattcgaaccaggcggtgctgaagacgctggggcgcctcggcgccggcatcgacgtc
gtctcggaaggggaattgcgccgcgcgctcgcagccgacattccggcaagccgcatcatg
ttttcaggcgtcggcaagaccccatccgagatggatttcgcgctcgaggccggcatctac
tgcttcaacgtcgaatccgaacccgagctcgaaatcctcaaccagcgcgccgtcagcgcc
ggaaagaaggctccagtctccttccgtatcaacccggatgtcgacgcaaagacacattcg
aagatctcgaccggcaagaaggaaaacaagttcggcatctcctgggagcgcgcccgcgcg
atctacgcccatgccgccaagctgcccggcatcgaggtcaccggcatcgatatgcatatc
ggcagccagatcaccgagctgcagcccttcgatgacgctttcaagctgttgcgcgacctt
gtcgcgacgctccgcgccgacggccacacgatcgatcatgtcgatatcggcggcggcctc
ggcgtcccctataaggacgacaacaatccgccgccactgccggatgcctatgcagcgatc
gtcaagaaccagctgcgcgatctggactgcaaggtcatcaccgagcccggccgcctgatc
gtcggcaatgccggtattctggtgaccgaggtgctttatgtgaaggacggcggcgagaag
accttcgtcatcgtcgacggcgcgatgaatgatctcattcgcccgacgctctatgaggcc
tatcacgaaatccgcccggtgacgatttcggcggcgaatgcgccgcgcatccgcgccgac
gtcgtcggccccgtctgcgagaccggcgactatctggcgctcgaccgcgaaatggcgatg
ccgaagcccggtgatctgctggccgtcagcactgccggcgcgtatggcgccgtccaggcc
ggcacctacaacagccgcctgctggtccccgaagttctggttaagggcagcgatttccat
gcgatacgaccccgtagaacctatgccgagctgatcagcctcgactccgttcccgcctgg
ctcgactag
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