Rhizobium croatiense: PYR68_19810
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Entry
PYR68_19810 CDS
T09286
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rct
Rhizobium croatiense
Brite
KEGG Orthology (KO) [BR:
rct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rct03400
]
PYR68_19810 (addB)
Enzymes [BR:
rct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PYR68_19810 (addB)
DNA repair and recombination proteins [BR:
rct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PYR68_19810 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WET73647
LinkDB
All DBs
Position
complement(4041201..4044395)
Genome browser
AA seq
1064 aa
AA seq
DB search
MRERHQPRILTIPAGLPFLKTLATTLCDGRLTPLFRHDADDPLSLARVTIYLPTRRAVRV
LRSEFVDLLGGRSAILPIIRPLGETDDDSGYFDEALPATIDLAQPLSNTARLLELARLIL
AWRNKLPEIVRHIHSDSPLVAPASPADAIWLARNLAELIDSIETEDLDWSELSKLDTGDY
AAWWQLTAEFLQIASAFWPARLSELGKSSPARHRNAILRAEAARLSAAKPSGPVIIAGST
GSVPATADLIAAVADLPEGVILLPGLDLAMPEGHWQMIAPEPAPGQHANPASRSHPQYGL
SSLLKRLRLTRADVSTLDRPEADLDRRAEILSRALAPAEATSDWGTWKSELPGGALTSAF
NDVSLIEAANEREEATAIAVALRLALERPGQDGESRAALITPDRNLARRVMAELSRFGIL
ADDSAGTPLSATPQGTLLQLLLEAALRPGDPVATVALLKHPLARFGLERDALISATEALE
LLALRGGVTEVDISALEVLLTHQLAEQALDRHAPQWRKALPADAANAASELARRITQATE
PLASALFRHRPEDRGKTASFTLSEWAQRTGRALEAVAADPQGNLADLWSNEAGDALASLL
GEVIDTDGQMEADGPQWIDIVAALAAGHAVKPRALSHPRLFIFGTLEARLQSVDTLILGG
LNEGSWPGQSANNPFIPRMMKTEIGLEPPERRIGQLAHDFEMANGTRHLIYSRALRQGST
PTVASRWLQRLLALGGEAFEDELKGRGARFLQWAGLIDRGESQAPAQRPSPKPPLALQPK
SYSFSEVGRLRRDPYAIYARRILRLDPVDAFNRDPGAAERGTLYHTIIDRFIRAAHVAGT
PEAAAAMELILTELFDMEKLPPHIDAVWRPRFREVARAFLEWEAGRRPAIRRTLTEVRGG
VELEAINIRLNGVADRIDITGPNAADIIDYKTGYNPSPAQARALLDPQLALEAAALRAGA
FRDAGSLTPRDLLYVRLRPGNRFQVDMVNNENAARSDKAKSAIDLAEESVDQLVKFVSLL
QSGEKGFTSRLIPAQQFDFGGDYDHLARVSEWSTAENEEGGGDE
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgagggagcggcaccagccacgaatcctgacgatcccggcgggccttcccttcctgaaa
accctggcgacgacactctgcgacggccggttgacgccgctcttccggcatgacgccgac
gacccgctgtcgcttgccagagtaacaatctatctgccgacccggcgcgccgtgcgtgtc
ctgcgctcggaattcgtcgatctgcttggcggccggtcggcgatcctgcctatcatccgc
cccctcggcgaaaccgacgatgacagcggctatttcgacgaggcactgccggcgacgatc
gacctcgcccagccactgtcgaatactgcgcggctgctggaactggcgcgcctgattctc
gcctggcgcaacaaactgccggagatcgtccgccatattcattcggactcgccgctcgtt
gcgccggcaagcccggcggacgcgatctggcttgcccgcaacctcgccgagttgatcgat
tccatcgaaaccgaggatctcgactggtcggaactgtcgaagctcgataccggcgactat
gccgcctggtggcagctgaccgcggagtttctgcagatcgccagcgccttctggccggcg
cggctttccgaactcggcaaatcatcgccggcgcggcacaggaacgccattctccgggcc
gaagcagcccggctttcggcagcaaagcctagcgggccggtcatcatcgctgggtcgacg
ggttcggtaccggcgaccgccgatctgattgccgccgtcgccgatctgcccgaaggcgtg
atcctgcttccaggcctcgatctcgccatgcccgaaggacattggcagatgatcgcgccg
gaaccagcgccgggccagcatgccaatcccgccagccggagccatccgcaatacgggctg
tcgtcgctgctgaagaggctgaggctgacacgggccgatgtcagcacccttgacagaccg
gaggccgatcttgaccggcgcgccgagatcctgtcccgagcgcttgccccggcagaggcg
accagcgactggggaacatggaagagcgagctgcccgggggagcgctgacttcggccttc
aacgacgtttcgctgatcgaagccgccaatgagcgcgaggaagcaaccgcgattgccgtc
gcgctccgactggcgctggaacggccggggcaggacggcgagagccgggcagccctgatc
acgccggaccgcaacctcgcccgtcgggtgatggcggagctttcccgcttcggcatcctc
gccgacgattcggccggcacgccgctttcggccacgccgcaaggcacgcttctgcaattg
ctgctggaggcggcactgcggccgggcgatccggtagcgaccgtcgctctgctcaaacac
cccctggctcgcttcggccttgaacgcgacgccctgatttccgccaccgaggcgctcgag
ctgctggcgctgcgcggcggcgtgaccgaggtggatatcagcgcgctcgaggtgcttctg
acccaccagcttgccgaacaggccctggaccggcacgcaccgcaatggcgaaaggcgctt
ccagccgacgccgccaatgccgcatccgagcttgcccgccggattacccaggcgaccgag
cctctcgcctctgcgctcttccggcaccgccccgaagatcgcggcaagacggcaagtttc
acgctgtccgaatgggcccagcgcaccggtcgtgctctcgaagcggtcgcggccgatccg
cagggcaatcttgccgatctctggtcgaacgaggcgggggacgcgcttgcctcccttctc
ggcgaagtgatcgacacggacgggcagatggaggccgacgggccgcaatggatcgacatc
gtggccgcgcttgccgccggccatgcggtgaagcctcgggcgctgagccatcccaggctg
ttcatcttcggcacgctggaagcccggctgcagagcgtcgatacgctgatcctcggcggg
ctgaacgaaggctcatggcccgggcagagcgccaacaatcccttcattccgcgaatgatg
aagacggagatcgggctcgaaccgcccgagcggcgcatcggccagctggcgcatgatttc
gagatggcgaacggcacccgccacctgatctattccagggcgctgcgccagggttcgacg
cccacggtcgcgtcgcgctggctgcagcggctgctggcgctcggcggggaggcgttcgaa
gatgaactcaaggggcgcggcgcccgtttcctgcaatgggccggtctcatcgatcgggga
gagagccaggcgccggcgcagcggccctcgccgaaaccgccgctggcgctgcagccgaaa
tcctactccttcagcgaggtcgggcggctgcgccgcgatccctatgccatctatgcccgc
cgcatcctgcggctcgatcccgtcgacgcgttcaatcgcgatcccggggcagccgaacgc
ggtacgctctatcacacgatcatcgaccggttcatccgcgcggcccatgtggccggcacg
ccggaggcggcagcggcgatggagcttatcctgaccgaactgttcgacatggaaaagctg
ccgccgcatattgatgccgtctggcggccgcgctttcgggaagtggcgcgcgccttcctc
gaatgggaggccggacgacggccagccatccgcaggacgctgacggaagtgcgtggcggc
gtggagctggaggcaatcaatatccggctcaatggcgtcgcggaccggatcgacattacc
gggccgaacgccgccgatatcatcgactacaagaccggctacaacccctcgccggcgcag
gcacgcgcgcttctcgatccgcagctcgcgctagaagcggcagccttgcgcgccggcgct
tttcgcgatgccggcagcctcacgccgcgggatctgctctatgtccgcctgcgtcccgga
aaccggttccaggtcgatatggtcaacaatgaaaacgccgcccgcagcgacaaggcgaaa
tcggcgatcgaccttgccgaggaatctgtcgaccagctggtcaagttcgtcagcttgctg
caatccggcgaaaagggctttacctcgcggctcattccggcacagcaatttgatttcggc
ggcgactacgatcatctcgcccgcgtctccgaatggtcgacggccgagaatgaggaaggt
ggcggcgatgagtga
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