Rhizobium croatiense: PYR68_20515
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Entry
PYR68_20515 CDS
T09286
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rct
Rhizobium croatiense
Pathway
rct03030
DNA replication
rct03410
Base excision repair
rct03420
Nucleotide excision repair
rct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PYR68_20515 (polA)
03410 Base excision repair
PYR68_20515 (polA)
03420 Nucleotide excision repair
PYR68_20515 (polA)
03440 Homologous recombination
PYR68_20515 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rct03032
]
PYR68_20515 (polA)
03400 DNA repair and recombination proteins [BR:
rct03400
]
PYR68_20515 (polA)
Enzymes [BR:
rct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PYR68_20515 (polA)
DNA replication proteins [BR:
rct03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PYR68_20515 (polA)
DNA repair and recombination proteins [BR:
rct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PYR68_20515 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PYR68_20515 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
NYN_YacP
IMS_HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
WET73777
LinkDB
All DBs
Position
4192472..4195465
Genome browser
AA seq
997 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHALPPLTRKTDGLPVGAVSGFCNMLWKLLRDARNTDVGVT
PTHLAVIFDYSAKTFRKDLYDAYKANRSAPPEELIPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEASGADVTIVSSDKDLMQLVTANVHMYDSMKDKQIGIPDVVEKWGVPPE
KMIDLQAMTGDSVDNVPGIPGIGPKTAAQLLEEYGDLDTLLDRATEIKQVKRRETILANI
EMAKLSRELVRLRTDVPLDLDLDALVLEPQNGPKLIGFLKTMEFTTLTRRVAEVCDCDAN
AIEPAVVRIEWGDAAHGPDLDAAEPAPVAGGIPDVSGPSVPVPPRAKAGVEGAFSPADLA
KVRAEAFATLPFDHSTYVTIRDLATLDRWIADARDTGLVAFDTETTSLDAMQAELVGFAM
AIADNVADPTGTKIRAAYVPLAHKNGVGDLLGGGLAENQVPMRDALPRLKALLEDAAVLK
VAQNLKYDYLLMKRYGIETKSFDDTMLISYVLDAGTGAHGMDPLSEKFLGHTPIPYKDVA
GSGRANVTFDLVDIDRATHYAAEDADVTLRLWLVLKPRLAAAGLTSVYERLERPLLPVLA
RMEARGITVDRQILSRLSGELAQGAARLEDEIYTLAGERFNIGSPKQLGDILFGKMGLAG
GSKTKTGQWSTSASVLEDLAAAGFELPRKIVDWRQLTKLKSTYTDALPGYVHPETKRVHT
SYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLISADYSQIELRVLAHV
AEIPQLTKAFEDGVDIHAMTASEMFGVPVEGMPGEVRRRAKAINFGIIYGISAFGLANQL
SIERSEAGDYIKKYFERFPGIRDYMESRKAMARDKGYVETIFGRRINYPEIRSSNPSVRA
FNERAAINAPIQGSAADVIRRAMIKMEPALVEAGLAERVRMLLQVHDELIFEVEDEDVEK
AMPIIVSVMENATMPALEMRVPLRVDARAATNWDEAH
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcacctcttcctagtcgacggttccggtttcatcttccgggcgttt
catgcattgccgccgctgacgcgcaagacggacggcttgccggtcggcgctgtttccggt
ttctgcaacatgctgtggaagcttttgagggatgcgcgcaataccgatgtcggggtgacg
ccgacccatcttgccgtcatcttcgattattccgccaagactttccgcaaggatctctac
gacgcctacaaggcaaaccggtcagccccgccggaagagctcatcccgcaattcgggctg
atccgcgaggcaacccgcgccttcaatttgccctgtatcgagaccgaaggcttcgaagcc
gacgacatcatcgccacctatgcccgccaggccgaagcatcgggcgccgacgtcaccatc
gtttcctccgacaaggatctgatgcagctcgtcacagcaaatgtccacatgtatgacagc
atgaaggacaagcagatcggcattcccgacgtcgtcgagaaatggggcgtgccgccggaa
aagatgatcgacctgcaggcaatgaccggcgattccgtcgacaatgtgcccggcattccc
ggcatcggcccgaaaaccgcggcccagctgcttgaggaatacggcgatctcgacacgctg
ctcgaccgagccaccgagatcaagcaggtcaagcgccgcgagaccattctagccaatatc
gagatggccaagctttcgcgcgaactcgtgcggctgcgcaccgacgtgccgctcgatctc
gatctcgacgcgctggtgctggagccgcagaacggcccgaagctgatcggctttctcaag
acgatggaattcacgacgctgacgcgacgggtagccgaagtctgcgattgtgatgcaaac
gccatcgaaccggcggtcgtccgcatcgaatggggagatgccgcccatggtcccgatctc
gatgcggccgagcctgcgcccgtggccggcggcattcctgatgtctcggggccatccgtg
cccgtgccgccgcgtgcgaaggctggcgtcgaaggcgccttttcacctgccgatcttgcc
aaggtgcgggccgaggcctttgcgacgctgcccttcgatcattccacctatgtgacgatc
cgcgatctggcgacgctcgaccgatggatcgccgatgcgcgcgacaccggcctagtggcc
ttcgataccgagacgacgtcgctcgatgccatgcaggccgagctcgtcggctttgcgatg
gcgatcgccgacaatgtcgccgaccccaccggcacgaagatccgcgccgcctatgtgccg
cttgcccacaagaacggcgtcggcgatctgctcggcggcggccttgccgaaaatcaggtc
ccgatgcgcgatgccctgccgcggctgaaggcgctgctggaggacgctgcggttctcaag
gtcgcccagaacctgaaatacgattacctcttgatgaagcgttatggcatcgaaacgaag
agtttcgacgacacgatgctgatctcctacgtgctcgacgccggcaccggcgcccatggc
atggacccgctctcggaaaaattcctcggccatacgccgatcccctacaaggatgtggcc
ggcagcggcagggcgaacgtgaccttcgatctggtcgatatcgaccgcgccactcactat
gccgccgaagacgccgacgtgacgctgcgcctctggctggtgttgaagccgcggctggcg
gcagccgggctgaccagcgtttatgaacggttggagcggccgctattgccggtgctggcg
cgcatggaagcgcgcggcatcaccgtcgaccggcagatcctgtcgcgcctgtccggcgag
ctggcccagggtgcggcgcggctggaggacgagatctatacgctggccggcgagcgcttc
aatatcggctcgccgaagcagctcggcgacatcctgttcggcaagatgggtcttgccggc
ggcagcaagacgaagaccgggcaatggtcgacctccgcctcggtgctcgaggatctcgcc
gccgccggtttcgagctgccgcgcaagatcgtcgactggcgccagctcaccaagctgaaa
tcgacctacaccgatgcgcttcccggctatgtgcatccggagacaaagcgggtccacacc
tcctactcgctggcctcgacgacgacaggtcgcctgtcctcctccgagccgaacctgcag
aacattccggtgcgcaccgccgaaggccgcaagatccgcaccgctttcatctcgacaccg
ggccacaagctgatttccgccgattacagccagatcgaactgcgcgtgcttgcccatgtg
gccgagatcccgcagctgaccaaggccttcgaggatggcgtcgatattcacgccatgacg
gcgtcggaaatgttcggcgtgccggtcgaaggcatgcctggcgaggtgcgccgccgcgcc
aaggcgatcaatttcggcatcatctacggcatttcggccttcgggctcgccaatcagctt
tcgatcgagcggtcggaagccggcgactatatcaagaaatatttcgagcgtttccccggc
atccgcgactatatggaaagccgcaaggccatggcgcgtgacaagggttatgtcgagacg
atcttcggcaggcgaatcaactatcccgaaatccgttcgtccaatccgtcggtgcgcgcc
ttcaacgagcgggccgcgatcaacgcgccgattcagggctcggccgccgacgtcatccgc
cgggcgatgatcaagatggagccggcgcttgttgaagccggtcttgccgagcgtgtccgc
atgctcttgcaggtgcacgacgaactcatcttcgaagtcgaagatgaggatgtcgaaaag
gcgatgccgatcatcgtctcggtcatggaaaacgccaccatgccggcgctcgaaatgcgc
gtgccgctgcgcgtcgatgcccgcgccgccaccaattgggacgaggcgcattaa
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