Ricinus communis (castor bean): 107260945
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Entry
107260945 CDS
T01087
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107260945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcu03041
]
107260945
Spliceosome [BR:
rcu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
107260945
Complex C
U4/U6.U5 tri-SnRNP related factors
107260945
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
HIND
Motif
Other DBs
NCBI-GeneID:
107260945
NCBI-ProteinID:
XP_015572570
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All DBs
Position
3:32428331..32432171
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AA seq
398 aa
AA seq
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MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
FGGNRKPTPFMCLVMKMLQIQPDKDIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYL
EPLYNDYRKLRQKLSDGRFSLTHVDEFIDDLLTKDYSCDIALPRVKKRWTLESLGTLEPR
KSVLEDDFEEEEEKEDNDQIDAFDNGVYDKDYYHGRSPTRERDRDRDRDRDRDRRRDSHR
YRDRDYDRDYDRDYDRERERGRGRERERDRDRDRDRDRDNDRDRDWDRDNDRDRYRLREE
KDYGRERDREREREGRERERRDRERGRRRSYSRSRSRSRDRKRRDRSSSPRRRGDGQEEP
KKKKEKKEKKKDDGTDHPDPEIAEANKLRAALGLKPLK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaggacagatccagcagcgaagagtataaggggaacgaatccacagaaccta
gtggagaagattttgagatctaagatctatcagaatacttactggaaggagcaatgtttc
ggtttaactgccgagacccttgtcgacaaggccatggagctcgatcatcttggcggtact
ttcggtggtaaccgcaaacctactccctttatgtgtttggtcatgaagatgctccagatc
cagcccgataaggacattgtcgtcgagttcatcaaaaacgacgattacaaatacgttcgc
attttaggtgctttttatttgcgtcttactggtactgatgttgatgtttaccgctacctt
gaaccgttatacaatgactatcggaaattgaggcaaaagttatccgatggaagattttct
ttgactcatgttgatgagttcattgatgatcttctcaccaaagattattcctgtgatatt
gctcttccccgtgttaagaaaagatggactcttgaatcacttggtacacttgaacctaga
aagagtgtcttggaagatgattttgaggaggaggaagagaaagaggacaatgaccaaatt
gatgcttttgacaatggagtttatgataaggactactaccacggaagaagtcccacgcgc
gaaagggatagggatagggatagagatagggatagggatagaagacgtgacagccataga
tacagggatcgggactatgaccgcgactatgatagggactatgacagagaacgggaacga
ggacgtggacgtgaaagggaaagagatagggacagggatcgtgaccgggatagggacaat
gacagggatcgtgactgggatagggacaatgatagggatcgttatcgcttaagagaagaa
aaggattatggtcgggagagggaccgagaaagagaaagggaaggtagagagcgggagagg
cgagatagggagcgtggtaggcgaaggagttattcaaggagccgaagtagaagtagggat
cgcaagagacgggaccgcagcagtagtccaaggaggcggggagatggacaggaagagcca
aagaagaagaaggaaaagaaggaaaagaagaaggatgatggcacagaccacccagatcca
gagattgcagaagctaataagcttagggcagcccttggattgaaaccactgaagtga
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