Ricinus communis (castor bean): 107261415
Help
Entry
107261415 CDS
T01087
Name
(RefSeq) sm-like protein LSM5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03018
RNA degradation
rcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107261415
09123 Folding, sorting and degradation
03018 RNA degradation
107261415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
107261415
03041 Spliceosome [BR:
rcu03041
]
107261415
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107261415
mRNA degradation factors
5'-3' decay
Lsm complex
107261415
Spliceosome [BR:
rcu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107261415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF7452
Ntox4
Motif
Other DBs
NCBI-GeneID:
107261415
NCBI-ProteinID:
XP_015575945
LinkDB
All DBs
Position
7:complement(24604581..24608395)
Genome browser
AA seq
87 aa
AA seq
DB search
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR
RITKLDQILLNGNNIAILVPGGSPDPE
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaatccctcccagcttctcccttcagagcttatagatcgctgcattgggtca
aaaatctgggtaattatgaaaggagataaggagcttgttggcactctaagaggatttgac
gtttatgtgaatatggtgcttgaagatgtcactgaatatgagatcactgctgaagggcgg
cggataacaaagcttgatcagattctactgaatgggaacaacattgccattctggttcct
ggtggttcccctgatccagaatga
DBGET
integrated database retrieval system