KEGG   Ricinus communis (castor bean): 107261440
Entry
107261440         CDS       T01087                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107261440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcu03019]
    107261440
   03041 Spliceosome [BR:rcu03041]
    107261440
Messenger RNA biogenesis [BR:rcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     107261440
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107261440
Spliceosome [BR:rcu03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    107261440
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 BRAP2
Other DBs
NCBI-GeneID: 107261440
NCBI-ProteinID: XP_015576162
LinkDB
Position
5:13555647..13563092
AA seq 365 aa
MDPQDQQDTLPGEETNNFHSHDDKSHSHSGDGASPGKIFIGGLARETTTAQFVKHFGKYG
EITDSVIMKDRKTGQPRGFGFVTYADPSVVDQVIQDSHVINGKQVEIKRTIPKGAIGARD
FKTKKIFVGGIPTTVTEVEFKEFFMQYGEVIEHQIMRDHSTNRSRGFGFITFDTEQAVDD
LLAKGNKLELAGGQVEIKKAEPKKPNPPLPSSKRYNDSRPGFGDAYDGFGGSGFGGGGGG
GGAYRSGGPYGSRSGTYGGYGGGEFGGYGGYGGGGIGAYRGEPSFGYSGRYGGSFSRGYD
LGGGYGGPGEGYGGYGSGGGSGGGYGGSYDSSLGGGYGGSSGGSYYGSRGGYGGAGSGRY
HPYGR
NT seq 1098 nt   +upstreamnt  +downstreamnt
atggatcctcaagaccaacaagatacccttcctggagaagaaactaacaacttccactct
catgacgataagtctcattctcactctggagatggagctagtcccggaaaaatttttatc
ggaggtttagctagagagactactacagcacaatttgttaagcattttggtaaatatggt
gaaattactgattctgttataatgaaggaccgaaagactggccaacctcgtggatttggg
tttgttacctatgctgatccttctgttgttgatcaagttattcaggactcccatgttatt
aatggcaaacaagtggaaatcaaaagaacaataccaaagggagctataggagctagggat
ttcaagacaaaaaagatttttgtaggtggaattcccactactgtgactgaagtcgagttc
aaggaattctttatgcaatatggtgaggtcattgaacaccagataatgcgtgatcactcc
accaatcgctcacgtggctttggttttattacatttgacacggagcaggcagtagatgat
cttttggctaaggggaataagcttgagttggctggaggccaggttgagatcaagaaggca
gagccaaagaagcctaaccccccactaccttcttctaagcgttataatgattcaaggcct
ggatttggtgatgcgtatgatggatttggaggcagtggctttggtggtggtggtggtggt
ggtggtgcttataggtctggtgggccctatggaagtagatctggtacttatggtggatat
gggggaggtgaatttggtggatatggaggatatggaggtggtggtattggggcttacaga
ggggagccctcctttggatattctggccggtatggaggtagctttagcaggggttatgac
ttaggaggtggttatggtggcccgggagaaggctatggtgggtatggtagtggtggagga
tctggcggtggctacggaggtagctatgactctagtcttgggggtggttatggaggaagc
agcgggggttcctactatggaagtagagggggatatggaggtgccggtagcggtagatac
catccctacgggaggtag

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