Ricinus communis (castor bean): 107261792
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Entry
107261792 CDS
T01087
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00280
Valine, leucine and isoleucine degradation
rcu00650
Butanoate metabolism
rcu01100
Metabolic pathways
rcu04146
Peroxisome
Module
rcu_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
107261792
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
107261792
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107261792
Enzymes [BR:
rcu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
107261792
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GFIT
Motif
Pfam:
HMGL-like
PSME4_C
Motif
Other DBs
NCBI-GeneID:
107261792
NCBI-ProteinID:
XP_015578985
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Position
1:complement(34049280..34056950)
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AA seq
433 aa
AA seq
DB search
MSSLEEPLALDKLPSMSTIDRIQRFSSGACRPSVDDMGMGTFWIEGRNCSTSNSCEEDYE
YTREMFPWKRHTRDLSQGDSVNQRTMSLGRNHMVCGKVWDSRYFPDCQYNSKSNDRDVWG
YTNKFLKGMPKFVKIVEVGPRDGLQNEKNIVPTDVKIELIRRLVSSGLAVVEATSFVSPK
WVPQQLADARDVMKAVKSLEGSRLPVLTPNLKGFEAAVAAGAKEVAVFASASESFSKSNI
NCSIEESLARYRAVTNAAKELGVPVRGYVSCVVGCPVDGAVSPSEVAYVAKELHDMGCFE
ISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHFHDTYGQSLSNILVSLQMGISTVDSS
IAGLGGCPYAKGASGNVATEDVVYMLHGLGVKTNVDLSKLLSAGDFISKHLARQSGSKTA
IALSRVTADASKI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttagaagagccacttgctcttgacaagttgccaagcatgagtaccattgac
aggattcagaggttctcttctggtgcttgccggccgagcgtggatgatatgggaatggga
actttctggattgaaggaaggaattgcagcacatccaacagttgcgaggaagattatgag
tatacaagagagatgtttccctggaaaagacatacaagggatctgtcccaaggtgactct
gtcaatcaaaggaccatgagcttaggcaggaaccatatggtgtgtggaaaggtttgggat
tcacggtactttccagattgtcaatataactccaaatccaatgacagagatgtgtggggt
tatacaaataagtttctgaaaggcatgccaaagtttgtgaagatagttgaagttggtcca
agggacggactacagaatgagaaaaatattgtacccacagatgttaagattgaactgatt
cgcagattagtatcttcagggttggcagttgttgaggctacaagttttgtatctccaaaa
tgggttcctcagcagttagcagatgcaagagatgtaatgaaagcagttaaaagtttggag
ggctctagacttcctgttctaacacctaatctaaaaggatttgaagcagctgttgctgct
ggtgccaaggaagtagcagtttttgcatccgcttctgagtcattttcaaagtcaaatatt
aattgcagcattgaagagagtcttgctcgttaccgtgctgttacgaatgctgcaaaagag
cttggagttcctgttcgagggtatgtctcatgcgtagttgggtgtcctgtggatggagca
gtttctccttcagaagtggcatatgtagcaaaagaacttcatgatatgggctgcttcgaa
atttctcttggtgatacaattggtgttggcacacctgggaccgttgttcctatgcttgag
gctgtaatggctgttgttcctgttgaaaagcttgctgtccacttccatgatacttatggg
caatctctttcgaatattttagtttccctccagatggggattagcacagtggactcatca
attgcgggtttaggcgggtgcccatatgctaagggagcatcgggcaatgttgccactgaa
gatgttgtctacatgcttcatgggcttggtgtgaagacaaatgtggatctatcaaaactc
ctctctgctggggatttcataagcaagcacttagctcgccagtctggttcaaagactgct
attgccttgagccgagttacagctgacgcctctaagatatga
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