Ricinus communis (castor bean): 107262277
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Entry
107262277 CDS
T01087
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00040
Pentose and glucuronate interconversions
rcu01100
Metabolic pathways
Module
rcu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107262277
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
107262277
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
pAdhesive_6
Cytomega_UL20A
Motif
Other DBs
NCBI-GeneID:
107262277
NCBI-ProteinID:
XP_015582599
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Position
7:22678101..22679845
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AA seq
393 aa
AA seq
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MNSKIIFSIIFMFLLSMCIPKAKSVDVDITTLGAKADEKTDIITALMDAWKQACAAKGAS
KVIIPKGTYLLGGPVIMAGPCQGTVELVVEGIIKAPTTLKGDTWVSFEHVDQFTMSGGGT
FDGQGQAAWGQNDCAKDAKCDAMAYNLRFNYLNKALIHDITSLNSKNFHVNILGCNDITF
KSFTVTAPATSLNTDGIHIGRSKGVNIIDTKIGTGDDCISIGDGSQQVHITNVKCGPGHG
ISIGSLGRYPNEEPVSGIFVEHCILSNTDNGLRIKSWPGMQSGTATDLHFEDITMDNVKN
PILIDQMYCPYNQCNHKAASKVKVSNVSFKRITGTSATPLAVQLVCSSGLPCESVELEDV
DLKYTGGDGPATSECSNVKPKIAGTFNVAGCEA
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgaaaataattttctcgataatatttatgtttttattgtcgatgtgtattcct
aaagcaaaatcagttgacgttgatataacaacacttggtgccaaagcagatgagaagaca
gatattattacagctttaatggatgcttggaaacaagcatgtgcagcaaaaggtgcaagt
aaagttataattccgaaagggacatatttgctaggtggtccagtaataatggcaggccct
tgccaaggaacagtagaacttgtagttgaaggaataataaaagccccgacaactttaaaa
ggagacacatgggttagtttcgaacatgttgatcagtttacaatgtctggtggcggaact
tttgatggtcaagggcaagctgcatgggggcaaaacgattgtgcaaaagatgcaaaatgc
gatgcaatggcttataatttgagattcaattatctcaacaaagccttaattcatgatata
acttctctcaacagtaagaattttcatgtcaacatcttgggatgcaatgacattaccttt
aaaagtttcacagttactgcacctgcaactagcctaaatacagatggaattcacattgga
cgatcaaaaggtgttaacattattgatacaaaaatcggtaccggtgatgattgcatctca
atcggtgatggtagccaacaagtacatatcacaaatgtaaaatgtggaccaggccatggc
attagcattggaagtttagggaggtatcctaatgaagagcctgtgtctggaatttttgtt
gaacattgcatcctctcaaatactgataatggtttgaggattaaatcttggcctggaatg
caaagcggtactgcaactgatttacattttgaagatattacaatggacaatgtgaagaat
cccatccttatagatcagatgtattgtccatataatcagtgcaaccataaagcagcatcg
aaggtaaaggttagtaatgttagcttcaagcgtataacaggaacttctgcaactcctctg
gctgttcaacttgtttgtagtagtggcctcccatgtgagagtgtagagcttgaagatgtt
gatcttaaatatacgggtggtgatggccctgcaacatctgaatgcagtaatgtgaagcca
aaaattgcaggaacatttaacgtagctggatgcgaagcttaa
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