Ricinus communis (castor bean): 107262423
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Entry
107262423 CDS
T01087
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcu03000
]
107262423
04121 Ubiquitin system [BR:
rcu04121
]
107262423
Transcription factors [BR:
rcu03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
107262423
Ubiquitin system [BR:
rcu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
107262423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
R3H
Motif
Other DBs
NCBI-GeneID:
107262423
NCBI-ProteinID:
XP_015583646
LinkDB
All DBs
Position
3:complement(5229571..5233926)
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AA seq
1104 aa
AA seq
DB search
MSFPQSRNDRRDRSRGSNQISHQTWVPRGSTSTVVMNPPTSTFNSNPNNGIGSDCSNDTK
FAPPNFRHGTSNTNNAFRGRNPVPNNYRRDRERERSQTQQVKELKQKDPNLPQLVQEIQD
KLVKGIVECMICYDMVRRSASIWSCSSCYSIFHLNCIKKWARAPTSIDLSAEKNQGFNWR
CPGCQSVQLTSSKEIRYACFCRKRIDPPSDLYLTPHSCGEPCGKPLERGIPGLGESNEDL
CPHVCVLQCHPGPCPPCKAFAPPRVCPCGKKVITTRCSDRRSVLTCGQRCDKLLQCSRHR
CEKICHMGPCDPCQVLVNASCFCKKSVEVVLCGEMAIKGEVKAEDGVFSCNSICGKKLGC
GNHLCGETCHPGSCGDCYLTPDRVTSCYCGKTSLEVERKCCLDPIPNCTQTCGKLLPCKI
HHCKEVCHAGDCSPCLVLVTQRCRCGSTSRTVECFKTRVESEKFTCDKPCGRKKNCGRHR
CSERCCPLSNPNSLLSGDWDPHFCQMACGKKLRCGQHSCESLCHSGHCPACLETIFTDLS
CACGRTSIPPPLPCGTPPPSCQLPCSVPQPCGHSASHSCHFGDCPPCSVPIAKECVGGHV
VLGNIPCGSKDIRCNKLCGKTRQCGLHACGRTCHPPPCDASCGSEAGSRASCGQTCGAPR
RDCRHTCTAVCHPSVSCPDVRCEFSVKITCSCTRITALVPCDAGGSSSGFNADSVFEASI
VQKLPVPLQPVESMGKKIPLGQRKLMCDDECAKLERKRVLADAFDITQNLEALHFGENSA
VTELIADVYRRDPKWVLAVEERFKYLVLGKNRGSLSALKVHVFCPMLKDRRDAVRLIAER
WKLTIYSAGREPKRFIVVYVTPKSKAPSRVIGIKGTTTLLAPHPPTFDPLVDMDPRLVVS
FLDLPREADISSLVLRFGGECELLWFNDKNALAVFNDPARAATAMRRLDHGSAYHGAAVV
YQNGSSSVTSAATNPWGGAGGAQEGAASLKSWKNAVVPEDSWGSEEWSHGSVNVQASAWK
GKETPIAASINRWTLLDSESSVSSSAASIKTEDPETRGGSCSSSGLESNASISYSSGELG
GVSSRAELPEVVDDWEKAYDDENI
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcctcaatcaagaaatgatcgaagggataggagtagaggttccaatcaaatt
tcccatcaaacatgggtcccaagaggatcaacatcaacagtggttatgaatccacctact
tcaaccttcaattctaaccctaataatgggattggcagtgattgctctaatgatactaag
tttgcaccgcctaattttaggcatggtaccagcaatactaataatgcctttagaggtcgg
aacccggtgcccaataattacaggagggatagggagagggagaggagccagactcaacag
gttaaggagctgaaacagaaagaccccaatttgccgcagctcgtgcaagaaattcaggac
aaacttgtgaagggtattgttgagtgtatgatttgctatgatatggtgcggaggtctgct
tccatttggtcatgctcaagttgttattctatttttcatttgaattgcatcaagaagtgg
gctcgtgctcctacttctattgacttgtcagctgagaagaatcaaggttttaattggcga
tgcccgggttgtcagtctgtgcagctcacatcatcaaaggaaattcggtatgcttgcttt
tgtaggaagaggattgacccaccttcagatttgtatctgaccccacattcttgtggtgaa
ccatgtggtaagccacttgagagggggattccaggtctgggtgagagcaatgaggatctt
tgtcctcatgtttgcgtcttgcaatgtcatccaggtccatgccctccttgtaaggcattt
gctccaccacgggtgtgtccatgtgggaagaaagtaatcacaacaagatgctctgatcga
aggtctgttcttacttgtggccaacgttgtgataagcttctacaatgttcgcgtcatcga
tgtgagaagatatgccatatgggtccttgtgatccttgtcaggttctagttaatgcatca
tgtttttgcaagaaaagtgtggaggttgtcttgtgcggagaaatggctataaaaggtgaa
gtgaaagctgaagatggtgttttctcttgtaactcaatatgtggaaaaaagctgggttgt
ggaaatcacttgtgtggtgagacttgccatccaggttcttgtggggattgttacctgacg
ccagacagggtgacatcatgctattgtgggaaaacaagtttggaggtggaaagaaagtgt
tgtttggacccaatcccaaactgtacacaaacttgtggtaaacttcttccatgtaagata
caccattgtaaggaggtttgccatgctggggattgctcaccttgtctagttcttgtcacc
caaagatgtcggtgtggatcaacctctagaaccgtggaatgcttcaaaacaagagtagag
agtgaaaaatttacatgtgataaaccttgtggccggaaaaaaaactgtgggaggcaccgg
tgtagtgaaaggtgctgtccactttccaacccaaacagtcttctctctggtgattgggat
ccacacttttgtcagatggcttgtgggaagaagctgaggtgtggacaacattcttgtgaa
tcgctatgtcatagtggacattgtccagcgtgccttgagacaatctttaccgacttgagc
tgtgcatgtgggagaacttcaattcctcctccattgccatgtggtacacctccaccttca
tgtcagctcccatgctcagttcctcagccttgtggtcattcagcttctcatagctgccac
tttggagactgcccaccttgttcagtccctatagcaaaggagtgtgtgggtgggcatgtg
gttctggggaacataccttgtggctcaaaggatatcagatgcaataaactttgtggtaag
actaggcagtgtggcttacatgcatgtggcagaacttgtcatccaccgccttgtgatgct
tcatgtggaagtgaagcaggttcaagagcatcatgtgggcagacgtgcggtgctcctaga
agagattgcagacatacttgcactgcagtttgtcatccttctgtatcttgtcctgatgtc
agatgcgagttctctgtcaagattacttgctcttgtaccaggataacagcactagttcct
tgtgatgctggaggaagcagcagtggttttaatgctgattctgtatttgaagcatccatt
gttcaaaagttgccagtaccacttcaaccagtggaatctatgggcaagaaaattccactt
gggcagaggaagctcatgtgtgatgatgaatgtgccaagttggagcgcaaaagggtactt
gctgatgcttttgatatcacccaaaacttggaagcccttcattttggtgaaaattctgct
gtaacggagctaattgctgacgtgtacaggcgtgatccaaagtgggtgcttgcagtagag
gagagattcaaatacttggttcttgggaaaaacagaggatccttaagtgctcttaaggtt
catgttttctgccctatgctgaaggataggagagatgcagttaggctgatagccgaacgg
tggaagcttacaatttattctgctggccgagaaccaaagcgtttcattgtagtatatgtc
actccaaaatccaaagcgccatcccgtgtgattggaataaagggtactacaactttacta
gccccccatccacccacctttgatcctcttgtagacatggatcccaggcttgttgtgtct
tttctagatttgccaagggaggcagatataagttctttggttctgaggtttggtggggaa
tgtgaactactatggttcaatgacaagaatgcacttgctgtatttaatgaccctgctcgt
gcagcaactgctatgaggaggttggatcatggatcagcgtatcatggggcagctgtagtt
taccaaaatggcagttcatcagttacttccgctgctactaatccttggggaggagcaggg
ggtgctcaagaaggagcagcatctttgaagtcatggaaaaatgctgtagttccagaagat
tcatggggcagtgaagagtggtctcatggatctgtgaatgttcaggcttctgcatggaaa
gggaaagaaactccaattgcagcttcaattaaccggtggactctcttagactcggaatct
tctgtaagttcatctgctgcatctatcaaaactgaggatcctgaaacacgagggggaagc
tgttctagttcaggattagaatcaaacgcaagcatttcctattcatctggggagcttgga
ggggtttcaagtcgagcagagttgcctgaagtggtggatgattgggagaaagcgtatgat
gatgagaatatataa
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integrated database retrieval system
