Ricinus communis (castor bean): 107262487
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Entry
107262487 CDS
T01087
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03022
Basal transcription factors
rcu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107262487
09124 Replication and repair
03420 Nucleotide excision repair
107262487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcu03021
]
107262487
03400 DNA repair and recombination proteins [BR:
rcu03400
]
107262487
Transcription machinery [BR:
rcu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107262487
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107262487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
107262487
NCBI-ProteinID:
XP_015584007
LinkDB
All DBs
Position
1:2019043..2020403
Genome browser
AA seq
70 aa
AA seq
DB search
MVNATKGLFISCDIPMAQFIINMNATLPTSQKFIIHVLDGTHLFVQPHVAEMIRSAIAEF
RDQNSYEKPS
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgccactaaaggattgttcatatcctgtgacatacccatggcgcaatttatc
atcaatatgaatgctacgctgcctacatcacagaagtttattattcatgttttggatggc
actcatctctttgtgcaaccccatgtagctgaaatgattcgaagtgctattgctgagttt
agagaccaaaactcctatgagaagccttcttaa
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