KEGG   Ricinus communis (castor bean): 107262575
Entry
107262575         CDS       T01087                                 
Name
(RefSeq) exopolygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu00040  Pentose and glucuronate interconversions
rcu01100  Metabolic pathways
Module
rcu_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    107262575
Enzymes [BR:rcu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     107262575
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim
Other DBs
NCBI-GeneID: 107262575
NCBI-ProteinID: XP_048229649
LinkDB
Position
5:5971080..5972905
AA seq 392 aa
MKSKLSILTIFVLLSISLKIRAEKVFDVKNFGATPSQKNDISKALLAAWKAACSTPGASR
ILIPHAKYALRDVLLEGPCKGSMVLQIKGTLMAPADPSEHHSQGWITFQHVDHLTISGGN
LDGRGKIAWGKNTCRTNVNCKNLPMNLRFDFVTNTIVEDLTSRDSKNFHMNLIGCQNFTL
QRIKIIAPGDSANTDGIHIGRSNGVNIIDSKIGTGDDCISIGDGSRNIKITGVRCGPGHG
ISIGSLGKYKNEEPVSGVYVKKCDLINTTNGIRIKSWPGLFSGTATDLHFEDISMNNVSN
AILIDQMYCPWNHCNSKASSNVKISKVTFSNIKGTSSTPTIVKLLCSKGLPCEGVELNNI
NVVYKGPEGPAKSECTNVKPKIGIRTDMLRGC
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgaaatctaaattgagtattttaacaatctttgtattgttatcaatttctttgaaaatt
agagcagaaaaggttttcgatgtgaaaaattttggtgctacacctagccaaaagaatgat
attagtaaggctctattagctgcttggaaggctgcttgttcaacaccaggtgcaagtaga
attttaattccacatgctaaatatgcattacgcgatgtacttttggaaggcccttgcaaa
ggttcaatggtacttcaaattaaaggaaccttaatggccccagcagaccctagtgagcac
catagccagggttggattactttccaacatgtcgatcatttaactatatctggaggtaat
ttggatggtcgaggaaaaattgcatggggaaaaaatacttgtcgtacgaatgtaaattgc
aagaatctcccaatgaatttaaggtttgattttgtcactaataccatcgttgaagattta
acttcccgggacagtaagaattttcacatgaatctcatcgggtgccaaaattttacactc
caacgtattaagattatagcgcctggtgatagtgctaatacagacggaattcacattgga
cgttctaatggagtaaacattattgattcaaagatcggcactggtgatgattgcatctct
attggtgatggcagtcggaatatcaaaatcacaggagtaagatgtggaccaggtcacggt
attagcatcggaagcttaggaaagtacaaaaatgaagaacctgttagtggagtttatgtt
aagaaatgcgatctcataaatactactaatggcataagaattaaatcttggccaggacta
ttcagtggcactgcaactgatctgcattttgaagatatttccatgaataacgtgagcaac
gctatcctcatagatcaaatgtactgtccttggaaccactgcaattccaaggcttcatca
aatgttaagatcagtaaggttactttctctaatataaagggcacttcttcaactcctacc
atcgttaaacttttatgcagtaaaggcttaccatgcgagggcgtggaactcaataatatt
aacgtcgtatataaaggccctgaaggtcctgcaaaatctgaatgtacaaatgtcaagcct
aaaatcgggatacgaacagatatgcttcgtggatgctaa

DBGET integrated database retrieval system